DRSC/TRiP Functional Genomics Resources

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Protein Alignment AT1G35630 and RNF167

DIOPT Version :9

Sequence 1:NP_174800.2 Gene:AT1G35630 / 840463 AraportID:AT1G35630 Length:318 Species:Arabidopsis thaliana
Sequence 2:NP_001357232.1 Gene:RNF167 / 26001 HGNCID:24544 Length:374 Species:Homo sapiens


Alignment Length:342 Identity:104/342 - (30%)
Similarity:146/342 - (42%) Gaps:76/342 - (22%)


- Green bases have known domain annotations that are detailed below.


plant    28 NTILSFDDVEATFTPIVRNSGECGILYVAEPLEACSDITNMAEKRSKYRSSYVLIVLG--GCSFE 90
            |..:.|.|:.|.|...:...|..|.|..|.|..|||.|.  ....:....|..:.:|.  .|:|:
Human    33 NASMDFADLPALFGATLSQEGLQGFLVEAHPDNACSPIA--PPPPAPVNGSVFIALLRRFDCNFD 95

plant    91 EKVRKAQKAGYKAAIVYNDGYDELLVPMAGNSSGVD----IHGLLVTRASGEVLKG-YADQDEMK 150
            .||..||||||.||:|:|...:||| .|..||..:.    |..:.:...|.|.|:. :..:...:
Human    96 LKVLNAQKAGYGAAVVHNVNSNELL-NMVWNSEEIQQQIWIPSVFIGERSSEYLRALFVYEKGAR 159

plant   151 LWLIPG--FGISSWSI--MGITFISLLAMSAI-LATCFVVRRHQIRQSVRDLPHGGQGLSCMPRD 210
            :.|:|.  |.:..:.|  .||..:.:|||.|: :|.|...|:...|..             :.::
Human   160 VLLVPDNTFPLGYYLIPFTGIVGLLVLAMGAVMIARCIQHRKRLQRNR-------------LTKE 211

plant   211 LLQSMPTEVYSGVLEE--------------SSTSV------TCAICIDDYCVGEKLRILPCKHKY 255
            .|:.:||..|...|..              |||..      .||||:|:|..|:|||:|||.|.|
Human   212 QLKQIPTHDYQKALNSSMFCPDLILPTCLISSTGFVGDQYDVCAICLDEYEDGDKLRVLPCAHAY 276

plant   256 HAVCIDSWLGRCRSFCPVCKQ------------------------NPRTGNDVPPASETTPLISP 296
            |:.|:|.||.:.|..||:|||                        .||.    .||||.|||:..
Human   277 HSRCVDPWLTQTRKTCPICKQPVHRGPGDEDQEEETQGQEEGDEGEPRD----HPASERTPLLGS 337

plant   297 SPNSITSLQSFYDLPIV 313
            ||...||..|....|:|
Human   338 SPTLPTSFGSLAPAPLV 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AT1G35630NP_174800.2 PA_C_RZF_like 11..155 CDD:239038 41/133 (31%)
zf-RING_2 232..275 CDD:290367 23/42 (55%)
RNF167NP_001357232.1 PA_C_RZF_like 20..170 CDD:239038 43/139 (31%)
RING-H2_RNF167 252..297 CDD:319711 24/44 (55%)
RING-H2 finger (C3H2C3-type) 254..295 CDD:319711 23/40 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 71 1.000 Domainoid score I4059
eggNOG 1 0.900 - - E1_KOG4628
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 136 1.000 Inparanoid score I2220
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 1 1.000 - - FOG0001489
OrthoInspector 1 1.000 - - mtm1436
orthoMCL 1 0.900 - - OOG6_103040
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X670
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.730

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