DRSC/TRiP Functional Genomics Resources

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Protein Alignment AT1G35630 and SPAC57A7.09

DIOPT Version :9

Sequence 1:NP_174800.2 Gene:AT1G35630 / 840463 AraportID:AT1G35630 Length:318 Species:Arabidopsis thaliana
Sequence 2:NP_593372.1 Gene:SPAC57A7.09 / 2542187 PomBaseID:SPAC57A7.09 Length:372 Species:Schizosaccharomyces pombe


Alignment Length:334 Identity:71/334 - (21%)
Similarity:131/334 - (39%) Gaps:70/334 - (20%)


- Green bases have known domain annotations that are detailed below.


plant    13 VICKLASAKVVLIGKNTILSFDDVEATFTPIV-----------------RNSGECGILYVAEPLE 60
            |..:|....|.|..:..:.......|:.|.::                 ||..:....|..:.::
pombe    45 VAIQLPDRNVTLWSRQAVFGKHFTNASATTVINLYLPSNFQEDMSGCPNRNDTDASYFYENDIID 109

plant    61 ACSDITNMAEKRSKYRSS------------------YVLIVLGGCSFEEKVRKAQKAGYKAAIVY 107
              .||..:.:|....:.|                  ::|:..|.|::.:|..:||:.|:|..||.
pombe   110 --YDIEYIEQKSYSSKPSARVQKDDGGESKDEAILDFLLVQRGKCTYFDKALEAQRLGFKGVIVG 172

plant   108 NDGYDE------LLVPMAGNSSGVDIHGLLVTRAS-----GEVLKGYADQDEMKLWLIP-GFGIS 160
            ::....      ::.|...:.|.|.|..|.|:.:|     .::|..|  :..:||:..| ..|..
pombe   173 DNRSPSSFRLHYMVAPDKVDESKVHIPSLFVSTSSYNLLWSDLLHSY--RQPLKLYAKPEELGDM 235

plant   161 SWSIM---GITFISLLAMSAILATCFV---VRRHQIRQSVRDLPH---GGQGLSCMPRDLLQSMP 216
            .|..:   ..:.|.|:.:.|:....|:   ..:.:.|:.:.|||.   ..:|......::..|..
pombe   236 FWPFLLCFSPSIIMLITVQALAIRKFIRTYRTKSKTRRFIEDLPSRTISREGFYSEEEEIENSTQ 300

plant   217 TEVYSGVLEESSTSVT----CAICIDDYCVGEKLRILPCKHKYHAVCIDSWLGRCRSFCPVCKQN 277
            ......:::||:...|    |.||::.:..|:|:..|||||::|..||..|:...|..||.|   
pombe   301 NGELVPLMDESTRRATFGVECVICLESFTKGDKVVALPCKHEFHRPCIAKWIVDYRHACPTC--- 362

plant   278 PRTGNDVPP 286
               ..:|||
pombe   363 ---NTEVPP 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AT1G35630NP_174800.2 PA_C_RZF_like 11..155 CDD:239038 34/187 (18%)
zf-RING_2 232..275 CDD:290367 18/46 (39%)
SPAC57A7.09NP_593372.1 COG5540 1..369 CDD:227827 71/334 (21%)
Peptidases_S8_S53 <144..211 CDD:299169 17/66 (26%)
zf-RING_2 320..362 CDD:290367 17/41 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 59 1.000 Domainoid score I3131
eggNOG 1 0.900 - - E1_KOG4628
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 74 1.000 Inparanoid score I2016
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm8357
orthoMCL 1 0.900 - - OOG6_103040
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X670
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.760

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