DRSC/TRiP Functional Genomics Resources

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Protein Alignment AT1G35625 and DMA1

DIOPT Version :9

Sequence 1:NP_001319153.1 Gene:AT1G35625 / 840462 AraportID:AT1G35625 Length:318 Species:Arabidopsis thaliana
Sequence 2:NP_011983.1 Gene:DMA1 / 856515 SGDID:S000001157 Length:416 Species:Saccharomyces cerevisiae


Alignment Length:260 Identity:47/260 - (18%)
Similarity:91/260 - (35%) Gaps:84/260 - (32%)


- Green bases have known domain annotations that are detailed below.


plant    40 FTPVVRRSGEYGLLYAAEPLDACSYLTNMAEKGSKFRPSYVLIVRGGCSFEEKIRNAQEAGYKAA 104
            |.|::|.:|      |...:....|...:.|..||....|..:|     |:.|:.:.....:|. 
Yeast   176 FDPIIRTAG------AGSQIIIGRYTERVREAISKIPDQYHPVV-----FKSKVISRTHGCFKV- 228

plant   105 IVYNDRYEELLVRMAGNSSGVYIHGVLVTRTS----------GEVL----------KEYTSRAEM 149
                |......::...:|||.:::...::..|          |:::          :|.....:|
Yeast   229 ----DDQGNWFLKDVKSSSGTFLNHQRLSSASTTSKDYLLHDGDIIQLGMDFRGGTEEIYRCVKM 289

plant   150 ELLLIPGFGISSWSIMAITFVSLLVISAVLASYFSVRRHRIRQHVRDLHHGGQGHSRMPKDLLQS 214
            ::.|     ..||.:.|..|                              ..:..||: |:|   
Yeast   290 KIEL-----NKSWKLKANAF------------------------------NKEALSRI-KNL--- 315

plant   215 MPTEVYTGVLEEGSTSVTCAICIDDYRVGEILRILPCKHKYHAVCIDSW--LGRCRSFCPVCKQN 277
              .::.||:.:|     .|:||::..:..:.:.|.||.|.:|..|:...  :...:..||.|:.|
Yeast   316 --QKLTTGLEQE-----DCSICLNKIKPCQAIFISPCAHSWHFHCVRRLVIMNYPQFMCPNCRTN 373

plant   278  277
            Yeast   374  373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AT1G35625NP_001319153.1 None
DMA1NP_011983.1 FHA 121..308 CDD:224630 27/182 (15%)
RING-H2_Dmap_like 325..371 CDD:319372 12/50 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X670
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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