Protein Alignment AT1G35625 and rnf13

DIOPT Version :9

• Sequence 1: NP_001319153.1
• Gene: AT1G35625 / 840462
• AraportID: AT1G35625
• Length: 318
• Species: Arabidopsis thaliana
• Sequence 2: NP_001008015.1
• Gene: rnf13 / 493377
• XenbaseID: XB-GENE-954771
• Length: 383
• Species: Xenopus tropicalis
• Alignment Length: 339
• Identity: 100/339 - (29%)
• Similarity: 155/339 - (45%)
• Gaps: 68/339 - (20%)

plant     4 SWITILSLLVISQLASSKVTLIGKNTFLSFDDVEANFTPVVRRSGEYGLLYAAEPLDACSYLTN- 67
            ::.:.|:::.:..:.:........|...:|||:.|.|...:...|..|.:..|:|.:||..::.
 Frog    19 AFCSCLAVIHLVPVQADVAAYTADNVSRTFDDLPARFGYRLPSDGLKGYIVTAKPENACQPISPP 83

plant    68 ---MAEKGSKFRPSYVLIVRGGCSFEEKIRNAQEAGYKAAIVYNDRYEELLVRMAGNSSGVY--- 126
               .....|.|   .|||.|..|:|:.|:.|||:||:|||:|||...:: |:.|..|...:.
 Frog    84 PLLRDNTSSVF---IVLIKRLECNFDLKVLNAQKAGFKAAVVYNVDSDD-LISMGSNDVDILKQI 144

plant   127 -IHGVLVTRTSGEVLKEYTS-------------RAEMELLLIPGFGISSWSIMAITFVSLLVISA 177
             |..|.:..:|...|||..|             ...:|..|||        .:.|..:.|::|..
 Frog   145 DIPSVFIGESSARFLKEEFSWEKGGYIVLVPDLTLPLEYYLIP--------FLIIVGICLVLIVI 201

plant   178 VLASYFSVRRHRIRQHVRDLHHGGQGHSRMPKDLLQSMPTEVYTGVLEEGSTSVTCAICIDDYRV 242
            .:.:.|...|||.|:            :|:.||.|:.:|...:    ::|.....||:|:|:|..
 Frog   202 FMITKFVQDRHRARR------------NRLRKDQLKKLPIHKF----KKGDEYDVCAVCLDEYEE 250

plant   243 GEILRILPCKHKYHAVCIDSWLGRCRSFCPVCKQN--PRTG------------NDVPPASETTPL 293
            |:.||||||.|.||..|:|.||.:.:..||||||.  |..|            |:|   ||.|||
 Frog   251 GDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSESDSDSSQEDNEV---SENTPL 312

plant   294 ISPGPNSITSLQSF 307
            :.|..::  |.|||
 Frog   313 LRPMASA--STQSF 324

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
AT1G35625	NP_001319153.1	None
rnf13	NP_001008015.1	PA_C_RZF_like	24..181	CDD:239038	43/160 (27%)
		RING_Ubox	239..284	CDD:388418	23/44 (52%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	49	1.000	Domainoid score	I5240
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	146	1.000	Inparanoid score	I2056
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1487241at2759
OrthoFinder	1	1.000	-	-		FOG0001489
OrthoInspector	1	1.000	-	-		mtm3637
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X670
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	7	7.060