Protein Alignment AT1G35625 and rnf13

DIOPT Version :10

• Sequence 1: NP_001319153.1
• Gene: AT1G35625 / 840462
• AraportID: AT1G35625
• Length: 318
• Species: Arabidopsis thaliana
• Sequence 2: NP_001008015.1
• Gene: rnf13 / 493377
• XenbaseID: XB-GENE-954771
• Length: 383
• Species: Xenopus tropicalis
• Alignment Length: 339
• Identity: 100/339 - (29%)
• Similarity: 155/339 - (45%)
• Gaps: 68/339 - (20%)

plant     4 SWITILSLLVISQLASSKVTLIGKNTFLSFDDVEANFTPVVRRSGEYGLLYAAEPLDACSYLTN- 67
            ::.:.|:::.:..:.:........|...:|||:.|.|...:...|..|.:..|:|.:||..::.
 Frog    19 AFCSCLAVIHLVPVQADVAAYTADNVSRTFDDLPARFGYRLPSDGLKGYIVTAKPENACQPISPP 83

plant    68 ---MAEKGSKFRPSYVLIVRGGCSFEEKIRNAQEAGYKAAIVYNDRYEELLVRMAGNSSGVY--- 126
               .....|.|   .|||.|..|:|:.|:.|||:||:|||:|||...:: |:.|..|...:.
 Frog    84 PLLRDNTSSVF---IVLIKRLECNFDLKVLNAQKAGFKAAVVYNVDSDD-LISMGSNDVDILKQI 144

plant   127 -IHGVLVTRTSGEVLKEYTS-------------RAEMELLLIPGFGISSWSIMAITFVSLLVISA 177
             |..|.:..:|...|||..|             ...:|..|||        .:.|..:.|::|..
 Frog   145 DIPSVFIGESSARFLKEEFSWEKGGYIVLVPDLTLPLEYYLIP--------FLIIVGICLVLIVI 201

plant   178 VLASYFSVRRHRIRQHVRDLHHGGQGHSRMPKDLLQSMPTEVYTGVLEEGSTSVTCAICIDDYRV 242
            .:.:.|...|||.|:            :|:.||.|:.:|...:    ::|.....||:|:|:|..
 Frog   202 FMITKFVQDRHRARR------------NRLRKDQLKKLPIHKF----KKGDEYDVCAVCLDEYEE 250

plant   243 GEILRILPCKHKYHAVCIDSWLGRCRSFCPVCKQN--PRTG------------NDVPPASETTPL 293
            |:.||||||.|.||..|:|.||.:.:..||||||.  |..|            |:|   ||.|||
 Frog   251 GDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSESDSDSSQEDNEV---SENTPL 312

plant   294 ISPGPNSITSLQSF 307
            :.|..::  |.|||
 Frog   313 LRPMASA--STQSF 324

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
AT1G35625	NP_001319153.1	PA_C_RZF_like	11..155	CDD:239038	44/164 (27%)
		HRD1	<164..>291	CDD:227568	45/140 (32%)
		RING-H2_RNF11	232..275	CDD:438131	22/42 (52%)
rnf13	NP_001008015.1	PA_C_RZF_like	24..181	CDD:239038	43/160 (27%)
		RING-H2_RNF13	231..289	CDD:438450	26/61 (43%)