DRSC/TRiP Functional Genomics Resources

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Protein Alignment AT1G35625 and RNF167

DIOPT Version :9

Sequence 1:NP_001319153.1 Gene:AT1G35625 / 840462 AraportID:AT1G35625 Length:318 Species:Arabidopsis thaliana
Sequence 2:NP_001357232.1 Gene:RNF167 / 26001 HGNCID:24544 Length:374 Species:Homo sapiens


Alignment Length:342 Identity:105/342 - (30%)
Similarity:147/342 - (42%) Gaps:76/342 - (22%)


- Green bases have known domain annotations that are detailed below.


plant    28 NTFLSFDDVEANFTPVVRRSGEYGLLYAAEPLDACSYLT---NMAEKGSKFRPSYVLIVRGGCSF 89
            |..:.|.|:.|.|...:.:.|..|.|..|.|.:|||.:.   .....||.|   ..|:.|..|:|
Human    33 NASMDFADLPALFGATLSQEGLQGFLVEAHPDNACSPIAPPPPAPVNGSVF---IALLRRFDCNF 94

plant    90 EEKIRNAQEAGYKAAIVYNDRYEELLVRMAGNS----SGVYIHGVLVTRTSGEVLKE-YTSRAEM 149
            :.|:.|||:|||.||:|:|....||| .|..||    ..::|..|.:...|.|.|:. :......
Human    95 DLKVLNAQKAGYGAAVVHNVNSNELL-NMVWNSEEIQQQIWIPSVFIGERSSEYLRALFVYEKGA 158

plant   150 ELLLIPG--FGISSWSIMAITFVSLLVIS--AVLASYFSVRRHRIRQHVRDLHHGGQGHSRMPKD 210
            .:||:|.  |.:..:.|.....|.|||::  ||:.:       |..||.:.|.     .:|:.|:
Human   159 RVLLVPDNTFPLGYYLIPFTGIVGLLVLAMGAVMIA-------RCIQHRKRLQ-----RNRLTKE 211

plant   211 LLQSMPTEVYTGVLEE--------------------GSTSVTCAICIDDYRVGEILRILPCKHKY 255
            .|:.:||..|...|..                    |.....||||:|:|..|:.||:|||.|.|
Human   212 QLKQIPTHDYQKALNSSMFCPDLILPTCLISSTGFVGDQYDVCAICLDEYEDGDKLRVLPCAHAY 276

plant   256 HAVCIDSWLGRCRSFCPVCKQ------------------------NPRTGNDVPPASETTPLISP 296
            |:.|:|.||.:.|..||:|||                        .||.    .||||.|||:..
Human   277 HSRCVDPWLTQTRKTCPICKQPVHRGPGDEDQEEETQGQEEGDEGEPRD----HPASERTPLLGS 337

plant   297 GPNSITSLQSFYDLPIV 313
            .|...||..|....|:|
Human   338 SPTLPTSFGSLAPAPLV 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AT1G35625NP_001319153.1 None
RNF167NP_001357232.1 PA_C_RZF_like 20..170 CDD:239038 46/140 (33%)
RING-H2_RNF167 252..297 CDD:319711 23/44 (52%)
RING-H2 finger (C3H2C3-type) 254..295 CDD:319711 22/40 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 71 1.000 Domainoid score I4059
eggNOG 1 0.900 - - E1_KOG4628
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 136 1.000 Inparanoid score I2220
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 1 1.000 - - FOG0001489
OrthoInspector 1 1.000 - - mtm1436
orthoMCL 1 0.900 - - OOG6_103040
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X670
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.770

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