DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hao2 and CG18003

DIOPT Version :9

Sequence 1:XP_006233084.1 Gene:Hao2 / 84029 RGDID:70972 Length:367 Species:Rattus norvegicus
Sequence 2:NP_001027401.1 Gene:CG18003 / 3771779 FlyBaseID:FBgn0061356 Length:366 Species:Drosophila melanogaster


Alignment Length:372 Identity:154/372 - (41%)
Similarity:233/372 - (62%) Gaps:22/372 - (5%)


- Green bases have known domain annotations that are detailed below.


  Rat    12 MPLVCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQ 76
            |.|||:.||:..|..||.|.:.|:....|.:..|...|..||:|:|||||.|||:|::|..|.|.
  Fly     1 MALVCVEDFEKKAVGQLEKNALDYYRSGAGEQFTLGLNREAFRRLRLRPRCLRDVSRLDISTKIF 65

  Rat    77 GQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLY 141
            |:::..|:.|:|||...:|.||||...||||.:|...:::|:.::.||||:.|.||:..:|||||
  Fly    66 GEQMQWPLGIAPTAMQKMAHPDGEVGNARAAGKAGSIFILSTLSTTSLEDLAAGAPDTIKWFQLY 130

  Rat   142 MKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILLKDLRALKE------ 200
            :..|....:::|:|||...|||||:|||.|:.|:||.|.||..:|.:::.|.:.:.:|.      
  Fly   131 IYKDRTITEKLVRRAEKANFKALVLTIDAPIFGHRRADVRNNFSLPSHLSLANFQGVKATGVGNA 195

  Rat   201 ------VRKEKPTQSVPVSFPKASFCWNDLSLLQSITRLPIILKGILTKEDAELAMKHNVQGIVV 259
                  :.:...:|..|      :..|.|::.|:.||.|||::||:||.|||.||.:....|::|
  Fly   196 AMGASGINEYVSSQFDP------TITWKDIAWLKGITHLPIVVKGVLTAEDAVLAQEFGCAGLIV 254

  Rat   260 SNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLA 324
            ||||.||:|.|.|||:||.|:|.||...:.|.:|||:..|.|:.|||||||:.:|:|||.:||||
  Fly   255 SNHGARQIDTVPASIEALPEIVKAVGDNLVVMLDGGIMQGNDIFKALALGAKTVFVGRPAVWGLA 319

  Rat   325 CKGEDGVKEVLDILTAELHRCMTLSGCQSVAEISPDLI----QFSRL 367
            ..|:.||:|:|.:|..:....|.|.|||::.:|:..::    |:::|
  Fly   320 YNGQKGVEEMLSVLRKDFETTMALIGCQNLGDITSAMVVHESQYAKL 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hao2XP_006233084.1 alpha_hydroxyacid_oxid_FMN 18..359 CDD:239203 148/352 (42%)
FMN_dh 25..363 CDD:279418 145/353 (41%)
CG18003NP_001027401.1 alpha_hydroxyacid_oxid_FMN 7..353 CDD:239203 147/351 (42%)
FMN_dh 17..359 CDD:279418 144/347 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334385
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54906
OrthoDB 1 1.010 - - D500918at33208
OrthoFinder 1 1.000 - - FOG0001123
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100930
Panther 1 1.100 - - O PTHR10578
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X693
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.860

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