Sequence 1: | XP_038944566.1 | Gene: | Kalrn / 84009 | RGDID: | 621865 | Length: | 2989 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001261019.1 | Gene: | Strn-Mlck / 36753 | FlyBaseID: | FBgn0265045 | Length: | 8255 | Species: | Drosophila melanogaster |
Alignment Length: | 3848 | Identity: | 725/3848 - (18%) |
---|---|---|---|
Similarity: | 1236/3848 - (32%) | Gaps: | 1339/3848 - (34%) |
- Green bases have known domain annotations that are detailed below.
Rat 153 ETSMVSVEGLTKLVDPSQLTEEFDGSLDYNHEEWIELRLSLEEFFNSAVHLLSRLEDLQEMLARK 217
Rat 218 EFPVDVEG---------SRRLIDEHTQ--------------LKKKVL-KAPVEELDREGQRLLQC 258
Rat 259 IRCSDGFSGRNCIPGSADFQSLVPKITSLL-DKLHSTRQHLHQMWHVR----KLKLDQCFQLRLF 318
Rat 319 EQDAEKMFDWISHNKELFLQSHTEIGVSYQHALDLQTQHNHFAMNSMNAYVNINRIMSVASRLSE 383
Rat 384 AGHYASQQIKQISTQ-----------------LDQEWKSFAAALDERSTILAMSAVFHQKAE--Q 429
Rat 430 FLSGVDAWCKMCSEGGLPSEMQDL--------ELAIHHHQSLYE---------QVTQAYTEVSQD 477
Rat 478 GKALLDVLQRPLSPGNSESLTATANYSKAVHQVLDVVHEVLHHQRRLESIWQHR-KVRLHQRLQL 541
Rat 542 CVFQQDV-QQVLDWIENHGEAFLSKHTGVGKSLHRARALQKRHDDFEEVAQNTYTNADKLLEAAE 605
Rat 606 QLAQTGECDPEEI--YKAARHLEVRIQDFVRRVEQRKLLLDMSVSFHTHTKELWTWMEDLQKEVL 668
Rat 669 EDVCADSVDAVQELIKQFQQQQTATLDATLNVIKEGEDLIQQLRSAPPSLGEPTEARDSAVSNNK 733
Rat 734 TPHSSSISHIESVLQQLDDAQVQ--MEELFHERKIKLDIFLQL---------------------- 774
Rat 775 -RIFEQYTIEVTAELDAWNEDLLRQMNDFNTEDLTLAEQRLQRHTERKLAMNNMTFEVIQQGQDL 838
Rat 839 H----------QYIMEVQASGIELICEKD---------VDLAAQVQELLEFLHEKQHELELNAEQ 884
Rat 885 THKRLEQCLQLRHLQAEVKQVLGWIRNGESMLNASLVNASSLSEAEQLQREHEQFQLAIESLFHA 949
Rat 950 TSLQKTHQSALQVQQKAEALLQAGHYDADAIRECAEKVALHWQQLMLKMEDRLKLVNASVAFYKT 1014
Rat 1015 SEQVCSVLESLEQEYRRDEDWCGGR--------------DKLG----PAAEMDHVIPLLSKHLEQ 1061
Rat 1062 KEA----------------FLKACTLARRNAEVFLKYIHRNNVSMPSVASHTRGPEQQVKAILSE 1110
Rat 1111 LLQRENRVLHFWTLKKRRLDQC--QQYVVFERSAKQALDWIQ-------ETGEYYLSTHTSTGET 1166
Rat 1167 TEETQELLKEY----GEFRVPAKQTK--------EKVKLLIQLADSFVEKGHIHATEIRKWVTTV 1219
Rat 1220 DKHYRDFSL---RMGKYRYTLE----KALGVNTEDNKDLELDIIPASLSDREVKLRDANHEVNEE 1277
Rat 1278 KRKSARKK--EFIMAELLQTE------------KAYVRD--LHECLETYLWEMT----------- 1315
Rat 1316 --SGVEEIPPGILNKEHIIFGNIQEIYDFHNNIFLKELEKYEQLPEDVGH--CFV---------- 1366
Rat 1367 -----------------------TWADKFQMYVTYCK--NKPDSNQLILEHA--GTFFDEIQQRH 1404
Rat 1405 G-----LANSISS------YLIKPVQRVTKYQLL-----LKELLTCCEE---------------- 1437
Rat 1438 -----------GKGELKDGLEVMLSVPKKANDAMHV-----SMLEGF----------DENLDVQG 1476
Rat 1477 ELILQDAFQVW--DPKSLIRK-GRERHLFL-FEISLVFSKEIKDSSG---------------HTK 1522
Rat 1523 Y-VYKN------------------KLLTSELGVTEHVEGDPCKFALW-SGRTP-----------S 1556
Rat 1557 SDNKTVLKASNIETKQE---WIKNIREVIQERIIH---LKGALKEPIQLPKT-------PAK--- 1605
Rat 1606 ---LRNNSKRDG-------------------------VEDGDSQGDGSSQPDTISIASR-----T 1637
Rat 1638 SQN---------TVESDKLSGGCELTVVL-------QD-----FSAAHSSELSIQVGQTVELLER 1681
Rat 1682 PSERPGWCLVRTTERSPPQEGLVPSSTLCISHSRSSVEMDCFFPLVKDSYSHSSGENGGKSES-- 1744
Rat 1745 ---VA--NLQSQPSLNSIHSSPGPKRSTNTLKKW--------------------LTSPVRRLNSG 1784
Rat 1785 KADGNIKKQKKV------------------RDGR-----------KSFDLGSPKPGDE----TTP 1816
Rat 1817 QGDSADEKSKKGWGEDEPDEESHTPL------------------------------------PPP 1845
Rat 1846 MKIFDNDPTQ-DEMSSLLAARQAPTDVPTAADLVSAIEKLVKSKLTLEGGSYRG----------- 1898
Rat 1899 --------------------------SLKDPTVCLNEGMAPPTPPRNL----------------- 1920
Rat 1921 -----EEEQKAKALRGRMFVLNELVQTEKD----YV----KDLG--------IVVEGFMKRIE-E 1963
Rat 1964 KGVPED----MRGKEKIVFGNIHQIY-----DWHK---------------------DFFLAE--- 1995
Rat 1996 ----LEKC----------------IQEQDRLA----------------------QLFIKHERKLH 2018
Rat 2019 IY-----VWYCQ--NKPRSE------YIVAEY--DA-YFEEVKQEINQRLTLS----DF-----L 2058
Rat 2059 IK-----PIQRITKYQLLLKDFLRYS--EKAGLECSDIEKAVELMCLVPKRCNDMMNLGRLQGFE 2116
Rat 2117 GTLTA--------------QGKLLQQDTFYVIELDAGMQSRTKERRVF----------------- 2150
Rat 2151 ------------------LFEQIVIFSELLRKGSL-------TPGYMF----------------- 2173
Rat 2174 ---KRS-------------IKMNYLVLEED-------VDDDPCKFALMNRE-----TSERVILQA 2210
Rat 2211 ANPDIQQAWVQDINQV---------LETQRDF----LNALQSPIEYQRKERSTAV--IRSQPPR- 2259
Rat 2260 -----------------------------VP-----------QASPR------------------ 2266
Rat 2267 -----PYSSVPVGSEKP-----------------PKGSSYNPPLPPLKISTS------------- 2296
Rat 2297 ---------NG-----SPGFDYHQPG---------DKFDASK--------QNDLGGCNGTSTMAV 2330
Rat 2331 IKDYYAL------------KENEICV-------SQGEVVQVLAVNQQNMC------LVYQPASDH 2370
Rat 2371 SPAAEGWVPGSILAPLTKATAPAESSDESIK---KSCSWHTLRMRKRADVENTGKNE-------- 2424
Rat 2425 -ATGPRKPKD-----------ILGNKASVKETNSSEESECDDLDPNTSMEILNPNFIQEVAPEFL 2477
Rat 2478 VPLVDVTCLLGDTVLLQCKACGRPKPTITWKGPDQNILDTDNSSATYTISSCDSGESTLKICNLM 2542
Rat 2543 PQDSGIYTCIATNDHGTASTSATVKVQGVPAAPNRPIAQERSCTSVILRWLPPASTGNCTISGYT 2607
Rat 2608 VEYREEGSQ-----VWQQSVASTLDTY-LVIEDLSPGCPYQFRVSASNPWGISLPSEPSEFVHL- 2665
Rat 2666 --PEYDAAADG------ATISWKE--NFDSAYTELNEIGRGRFSIVKKCIHKATRKDVAVKFVSK 2720
Rat 2721 --KMKKKEQAAHEAALLQHLQHPQYVTLHDTYESPTSYILILELMDDGRLLDYLMNHD-ELMEEK 2782
Rat 2783 VAFYIRDIMEALQYLHNCRVAHLDIKPENLLIDLRIPVPRVKLIDLEDAVQISGHFHIHHLLGNP 2847
Rat 2848 EFAAPEVIQGIPVSLGTDIWSIGVLTYVMLSGVSPFLDESKEETCINVCRVDFSFPHEYFCGVSN 2912
Rat 2913 AARDFINVILQEDFRRRPTAATCLQHPWL-QPHNGSYSKIPLDTSRLACFIERRKHQ---NDVRP 2973
Rat 2974 IPNVKSYIVNRVN 2986 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Kalrn | XP_038944566.1 | SEC14 | 42..180 | CDD:214706 | 7/26 (27%) |
SPEC | 193..413 | CDD:238103 | 45/265 (17%) | ||
SPEC | 314..539 | CDD:238103 | 43/261 (16%) | ||
SPEC | 540..769 | CDD:238103 | 36/233 (15%) | ||
SPEC | 894..1132 | CDD:238103 | 49/271 (18%) | ||
SPEC | 1138..1238 | CDD:197544 | 25/121 (21%) | ||
RhoGEF | 1287..1457 | CDD:238091 | 50/278 (18%) | ||
PH1_Kalirin_Trio_like | 1464..1586 | CDD:270060 | 37/184 (20%) | ||
SH3_Kalirin_1 | 1652..1711 | CDD:212786 | 13/70 (19%) | ||
SH3-RhoG_link | 1708..1892 | CDD:406906 | 48/280 (17%) | ||
RhoGEF | 1935..2104 | CDD:395496 | 49/292 (17%) | ||
PH2_Kalirin_Trio_p63RhoGEF | 2109..2243 | CDD:270061 | 37/247 (15%) | ||
SH3_Kalirin_2 | 2327..2385 | CDD:212787 | 15/82 (18%) | ||
Ig strand A | 2466..2469 | CDD:409353 | 0/2 (0%) | ||
I-set | 2474..2568 | CDD:400151 | 28/93 (30%) | ||
Ig strand A' | 2482..2485 | CDD:409353 | 1/2 (50%) | ||
Ig strand B | 2491..2498 | CDD:409353 | 2/6 (33%) | ||
Ig strand C | 2504..2512 | CDD:409353 | 1/7 (14%) | ||
Ig strand C' | 2515..2517 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 2523..2532 | CDD:409353 | 1/8 (13%) | ||
Ig strand E | 2534..2538 | CDD:409353 | 3/3 (100%) | ||
Ig strand F | 2547..2555 | CDD:409353 | 3/7 (43%) | ||
Ig strand G | 2558..2568 | CDD:409353 | 3/9 (33%) | ||
FN3 | 2572..2663 | CDD:238020 | 29/96 (30%) | ||
STKc_Kalirin_C | 2693..2940 | CDD:271017 | 82/249 (33%) | ||
Strn-Mlck | NP_001261019.1 | IG_like | 51..127 | CDD:214653 | |
Ig | <69..>112 | CDD:299845 | |||
I-set | 137..226 | CDD:254352 | |||
I-set | 235..314 | CDD:254352 | |||
Ig_2 | 244..314 | CDD:290606 | |||
I-set | 438..513 | CDD:254352 | |||
Ig | 454..510 | CDD:143165 | |||
I-set | 537..626 | CDD:254352 | |||
Ig | 555..618 | CDD:299845 | |||
I-set | 636..713 | CDD:254352 | |||
Ig | 652..712 | CDD:143165 | |||
SMC_N | <2190..2854 | CDD:280601 | |||
I-set | 5300..5388 | CDD:254352 | 21/108 (19%) | ||
IGc2 | 5313..5378 | CDD:197706 | 13/83 (16%) | ||
IG | 5412..5482 | CDD:214652 | 18/82 (22%) | ||
IGc2 | 5413..5481 | CDD:197706 | 18/80 (23%) | ||
I-set | 5542..5627 | CDD:254352 | 21/87 (24%) | ||
Ig | 5556..5621 | CDD:143165 | 16/67 (24%) | ||
Ig | 5654..5721 | CDD:143165 | 11/66 (17%) | ||
I-set | 5784..5874 | CDD:254352 | 19/100 (19%) | ||
IGc2 | 5797..5864 | CDD:197706 | 17/77 (22%) | ||
I-set | 5887..5970 | CDD:254352 | 15/82 (18%) | ||
Ig | 5902..5966 | CDD:143165 | 13/63 (21%) | ||
I-set | 5997..6086 | CDD:254352 | 15/97 (15%) | ||
Ig | 6026..6083 | CDD:143165 | 11/65 (17%) | ||
I-set | 6097..6187 | CDD:254352 | 20/107 (19%) | ||
Ig | 6114..6187 | CDD:299845 | 15/90 (17%) | ||
FN3 | 6216..6310 | CDD:238020 | 20/104 (19%) | ||
I-set | 6321..6412 | CDD:254352 | 13/93 (14%) | ||
Ig | 6328..6412 | CDD:299845 | 13/86 (15%) | ||
I-set | 6442..6531 | CDD:254352 | 14/89 (16%) | ||
Ig | 6459..6528 | CDD:143165 | 10/69 (14%) | ||
I-set | 6541..6632 | CDD:254352 | 11/90 (12%) | ||
IGc2 | 6555..6622 | CDD:197706 | 7/66 (11%) | ||
I-set | 6662..6754 | CDD:254352 | 17/91 (19%) | ||
Ig | 6679..6751 | CDD:143165 | 13/71 (18%) | ||
I-set | 6779..6868 | CDD:254352 | 13/89 (15%) | ||
IGc2 | 6793..6858 | CDD:197706 | 10/65 (15%) | ||
Ig | 6938..7022 | CDD:299845 | 13/87 (15%) | ||
I-set | 6939..7028 | CDD:254352 | 14/92 (15%) | ||
IG | 7075..7140 | CDD:214652 | 8/64 (13%) | ||
Ig | 7075..7140 | CDD:143165 | 8/64 (13%) | ||
IG | 7167..7239 | CDD:214652 | 10/71 (14%) | ||
Ig | 7173..7239 | CDD:143165 | 10/65 (15%) | ||
Ig | 7392..7475 | CDD:299845 | 28/110 (25%) | ||
IG | 7406..7475 | CDD:214652 | 22/73 (30%) | ||
FN3 | 7489..7588 | CDD:238020 | 30/99 (30%) | ||
S_TKc | 7620..7876 | CDD:214567 | 83/256 (32%) | ||
STKc_MLCK | 7626..7876 | CDD:271005 | 82/250 (33%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |