DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CASP7 and Strica

DIOPT Version :9

Sequence 1:NP_001253986.1 Gene:CASP7 / 840 HGNCID:1508 Length:388 Species:Homo sapiens
Sequence 2:NP_001260718.1 Gene:Strica / 35528 FlyBaseID:FBgn0033051 Length:527 Species:Drosophila melanogaster


Alignment Length:467 Identity:107/467 - (22%)
Similarity:168/467 - (35%) Gaps:117/467 - (25%)


- Green bases have known domain annotations that are detailed below.


Human     1 MRAGTRVALGSSTPAERTTPSQGRCKP-------RPALPRAAPPSAAPRLLVSLSLKGPQTLAAE 58
            ::.|....:||:|....||.|:.| .|       |...|..|..|.|.:...:| :|..||...:
  Fly    93 IKMGGEGPIGSTTTTTTTTSSRSR-PPSLNGVSFRSTQPFKATASNAGKRSSTL-VKTEQTTVTQ 155

Human    59 RRRETVPV-------------PAALPPWERWQMIRAVLKSRGLRIQQMKIQWMLSQTGPRLYRP- 109
            :...||..             |.|  .|..:........|..:...:.|....::.|.|.:..| 
  Fly   156 KNGRTVTQHLETHRVDLKGSRPKA--TWASFASTANSSTSSYVSPYRQKPSMAITCTSPNIKTPK 218

Human   110 --SSAPDSGTLYFTSKKKKNVTMRSIKT------------------------------TRDRVPT 142
              ||...|.....||..|.:.::.||.:                              |:.:|..
  Fly   219 TTSSTSSSSASSITSPPKPSSSVSSISSIFKSAPKQVDKPLSSTATPKPFISLGSSGGTKPKVTA 283

Human   143 YQYNMNFE-------------------KLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRS 188
            ...:.:.:                   |..:..|.|::.||.....  |.|:.:|.:.|...|..
  Fly   284 VAQSQDAQGTISTSLGISKSSLTKNKLKPARVYIFNHERFDNKNEF--RKGSAQDVKVLRATFEQ 346

Human   189 LGFDVIVYNDCSCAKMQDLLKKASEEDHTNAACFACILLSHG---------EENVIYGKDGVTPI 244
            |...|.|..|.:...::..::....:|..:.:....::||||         :::.....|.|.||
  Fly   347 LKCKVEVITDATLVTIKKTVRMLQTKDFEDKSALVLVILSHGTRHDQIAAKDDDYSLDDDVVFPI 411

Human   245 KDLTAHFRGDRCKTLLEKPKLFFIQACRGTELDDGIQADSGPINDTDANPRYKIPVEADFLFAYS 309
            .         |.:||.:||||.|:|||:|.....|...|:...|   .:|.       :.|..||
  Fly   412 L---------RNRTLKDKPKLIFVQACKGDCQLGGFMTDAAQPN---GSPN-------EILKCYS 457

Human   310 TVPGYYSWRSPGRGSWFVQALCSILEEHGKDLEIMQILTRVNDRVARHFESQSDDPHFHEKKQIP 374
            |..|:.|:|:.. |:.|:|.||..|...||..:|..|:..|...|    :.||.|      :|||
  Fly   458 TYEGFVSFRTED-GTPFIQTLCEALNRSGKTSDIDTIMMNVRQVV----KMQSKD------RQIP 511

Human   375 CVVSMLTKELYF 386
            .|.|.||.:..|
  Fly   512 SVTSTLTSKYVF 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CASP7NP_001253986.1 CASc 145..386 CDD:237997 68/268 (25%)
StricaNP_001260718.1 CASc 311..523 CDD:294037 68/243 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3573
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10454
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.