DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPNS1 and mfc1

DIOPT Version :10

Sequence 1:XP_047290695.1 Gene:SPNS1 / 83985 HGNCID:30621 Length:586 Species:Homo sapiens
Sequence 2:NP_001342985.1 Gene:mfc1 / 3361480 PomBaseID:SPAPB1A11.01 Length:495 Species:Schizosaccharomyces pombe


Alignment Length:280 Identity:55/280 - (19%)
Similarity:111/280 - (39%) Gaps:68/280 - (24%)


- Green bases have known domain annotations that are detailed below.


Human   115 LLNYMDRFTVAG------VLPDIEQFFNIGDSSSGLIQTVFISSYMVLAPVFGYLGDRYNRKYLM 173
            ::::|....:.|      .:|::.:.|...::...|..|:::...|:...:|..|.:.|.|:.|.
pombe    44 IISFMTMLCMYGSSVFMPSIPELCEKFGEPETLVVLGATLYVIGVMLGPLIFSPLSELYGRRPLN 108

Human   174 CGGIAFWSLVTLGSSFIPGEHFWLLLLTR------GLVGVGEASYSTIAPTLIADLFVADQRSRM 232
            ..|...::|:.:.::.  ..:..:.::.|      |.||:|      |....::|:|....|.:.
pombe   109 IFGYTLFALMQIPTAL--SVNLAMFVVFRFFSGFFGSVGLG------IGAGSLSDMFSKRDRGKY 165

Human   233 LSIFYFAIPVGSGL-----GYIAGSKVKDMAGDWHWALRVTPGLGVVAVL--LLFL-------VV 283
            :.|::..|.:|..:     |:||||.:     .|.|...:...|..|::|  ::||       :.
pombe   166 IGIYFLGICLGPAIAPIASGFIAGSSI-----SWRWEFWILLMLSGVSLLAGVVFLKETYAPVLK 225

Human   284 REPPRGAVERHSD--------------LPPLNPTSWWAD------------LRALARNPSFVLSS 322
            |:..:..:|:..:              ...::|...:|:            |..|...|..:|.|
pombe   226 RKQAKKLLEKQENQKSVEVKISEITESSQQIDPDKSFAEVVHILVTTIRRPLHLLCTQPIMILIS 290

Human   323 LGFTAVAFVTGSLALWAPAF 342
            |   .|..|.|.|.|...||
pombe   291 L---IVGTVYGILYLLFTAF 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPNS1XP_047290695.1 MFS_spinster_like 107..499 CDD:340886 55/280 (20%)
mfc1NP_001342985.1 MFS_Tpo1_MDR_like 46..485 CDD:340881 55/278 (20%)

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