DRSC/TRiP Functional Genomics Resources

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Protein Alignment TTC29 and ttc29

DIOPT Version :10

Sequence 1:NP_001287690.1 Gene:TTC29 / 83894 HGNCID:29936 Length:501 Species:Homo sapiens
Sequence 2:XP_002938976.1 Gene:ttc29 / 100498272 XenbaseID:XB-GENE-992354 Length:488 Species:Xenopus tropicalis


Alignment Length:482 Identity:234/482 - (48%)
Similarity:334/482 - (69%) Gaps:9/482 - (1%)


- Green bases have known domain annotations that are detailed below.


Human    27 MTTLPPLP-MTRPKLTALARQ-KLPCSSRKIPRS-----QLIKEKDDIDHYLEVNFKGLSKEEVA 84
            |:.:|.:| .:..:..:|..| |:|...:::|:.     .||:::...||..:.|.|.|||||.|
 Frog     1 MSAVPAMPRQSLQRFPSLVHQRKVPAQPKELPQKANYKIHLIRDRGVRDHNQQKNIKELSKEETA 65

Human    85 AYRNSYKKNICVDMLRDGYHKSFTELFALMERWDALREAARVRSLFWLQKPLEEQPDKLDYLYHY 149
            .||||.|.|||::|||.||||||:|::.:::||||||:||...|..|.|||||||.:|||.|.|:
 Frog    66 IYRNSLKNNICIEMLRKGYHKSFSEVYTVIQRWDALRDAAGPGSAIWHQKPLEEQQEKLDQLQHF 130

Human   150 LTRAEDAERKESFEDVHNNLYALACYFNNSEDKWVRNHFYERCFKIAQLIKIDCGKKEAEAHMHM 214
            |||||.|:|...:|:|:.|..|||.||....|.|:..||:|.||:.|..||:|.|:||||||.::
 Frog   131 LTRAEAAQRAGYYEEVYENQLALAQYFQEVGDDWLSYHFFECCFQTATKIKMDGGRKEAEAHSNI 195

Human   215 GLLYEEDGQLLEAAEHYEAFHQLTQGRIWKDETGRSLNLLACESLLRTYRLLSDKMLENKEYKQA 279
            |.:.||.|||.:||||||||:.||.|||||||||||.|.||||:|.|.|.|.|||||.|||.:||
 Frog   196 GSVEEEHGQLEKAAEHYEAFYHLTVGRIWKDETGRSHNSLACENLWRIYTLQSDKMLANKECQQA 260

Human   280 IKILIKASEIAKEGSDKKMEAEASYYLGLAHLAAEEYETALTVLDTYCKISTDLDDDLSLGRGYE 344
            ||.||||.::|:||.:||:|.||:|.|||||:::...:||:|.|:||.:||..|:|::|||:.|:
 Frog   261 IKTLIKAFDMAREGGNKKLEGEAAYRLGLAHISSGNPQTAITYLNTYMEISKMLEDNVSLGKAYK 325

Human   345 AIAKVLQSQGEMTEAIKYLKKFVKIARNNFQSLDLVRASTMLGDIYNEKGYYNKASECFQQAFDT 409
            |:||.|:|||::.|:::||:.|:|||:.|..:..|....:.||||:|.:|.|.||.:.|.:|::|
 Frog   326 AMAKALESQGKILESVEYLENFIKIAKLNNLNQSLAETYSCLGDIFNTRGNYEKACQYFSKAYET 390

Human   410 TVELMSMPLMDETKVHYGIAKAHQMMLTVNNYIESADLTSLNYLLSWKESRGNIEPDPVTEEFRG 474
            .:.|..:.|::|.:|.|||||||:|||||:...:|||..|:.:||:||.:|.:|..||...:...
 Frog   391 ALSLSELALIEEAQVQYGIAKAHEMMLTVSKLTDSADCASVGHLLTWKMNRSDIFGDPAKPDKLI 455

Human   475 STVEAVSQNSERLEELSRFPGDQKNET 501
            |..:  :::.::...:...|...:|||
 Frog   456 SMQD--TKDGDKSIAIMETPDIPENET 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TTC29NP_001287690.1 LapB 197..>408 CDD:442196 117/210 (56%)
TPR repeat 208..252 CDD:276809 31/43 (72%)
TPR repeat 259..289 CDD:276809 20/29 (69%)
TPR repeat 300..328 CDD:276809 14/27 (52%)
TPR repeat 333..369 CDD:276809 17/35 (49%)
TPR repeat 380..408 CDD:276809 11/27 (41%)
ttc29XP_002938976.1 LapB 117..417 CDD:442196 162/299 (54%)
TPR repeat 189..217 CDD:276809 18/27 (67%)
TPR repeat 233..270 CDD:276809 25/36 (69%)
TPR repeat 282..315 CDD:276809 16/32 (50%)
TPR repeat 320..356 CDD:276809 18/35 (51%)
TPR repeat 361..389 CDD:276809 11/27 (41%)

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