DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment AT1G22670 and rnf13

DIOPT Version :9

Sequence 1:	NP_173681.1	Gene:	AT1G22670 / 838873	AraportID:	AT1G22670	Length:	422	Species:	Arabidopsis thaliana
Sequence 2:	NP_001008015.1	Gene:	rnf13 / 493377	XenbaseID:	XB-GENE-954771	Length:	383	Species:	Xenopus tropicalis

Alignment Length:	352	Identity:	107/352 - (30%)
Similarity:	173/352 - (49%)	Gaps:	57/352 - (16%)

- Green bases have known domain annotations that are detailed below.

plant     3 LVVLLILTLLLFIVSYVVDAGQVILVDSNITRSFVDMEADFS---PSVTTVETGVVYVAEPLNAC 64
            |.|:.::.:...:.:|..|         |::|:|.|:.|.|.   ||...  .|.:..|:|.|||
Frog    24 LAVIHLVPVQADVAAYTAD---------NVSRTFDDLPARFGYRLPSDGL--KGYIVTAKPENAC 77

plant    65 RNLRNKPEQSPYGTSP-LVLIIRGGCSFEYKVRNAQRSGFKAAIVYDNVDRNFLSAMG-GDSDGI 127
            :.:...|......:|. :|||.|..|:|:.||.|||::|||||:|| |||.:.|.:|| .|.|.:
Frog    78 QPISPPPLLRDNTSSVFIVLIKRLECNFDLKVLNAQKAGFKAAVVY-NVDSDDLISMGSNDVDIL 141

plant   128 K---IQAVFVMKRAGEMLK-KYAGSEEMEVMLVPPNTEDSVWSL-YASIALILSLAIFCVMVTCV 187
            |   |.:||:.:.:...|| :::..:...::|||    |....| |..|..::.:.| |:::..:
Frog   142 KQIDIPSVFIGESSARFLKEEFSWEKGGYIVLVP----DLTLPLEYYLIPFLIIVGI-CLVLIVI 201

plant   188 FFYRYCSTIRNSTSQFNGMCRRTVKAMPSVTFTCAKIDNTTGFSCAICLEDYIVGDKLRVLPCSH 252
            |........|:...: |.:.:..:|.:|...|  .|.|...  .||:||::|..|||||:|||||
Frog   202 FMITKFVQDRHRARR-NRLRKDQLKKLPIHKF--KKGDEYD--VCAVCLDEYEEGDKLRILPCSH 261

plant   253 KFHVACVDSWLISWRTFCPVCKR-----------DARTTADEPLATESTPFLSSSIATSSLVCID 306
            .:|..|||.||...:..|||||:           |:.::.::...:|:||.|.
Frog   262 AYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSESDSDSSQEDNEVSENTPLLR------------ 314

plant   307 SPPLGSSVSFSPAHVSSSFIHQFVRSS 333
              |:.|:.:.|...:|.|...|.:..|
Frog   315 --PMASASTQSFGAISESHSQQNMMES 339

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
AT1G22670	NP_173681.1	PA_C_RZF_like	17..160	CDD:239038	53/151 (35%)
		HRD1	<163..>314	CDD:227568	46/162 (28%)
		mRING-H2-C3H2C2D_ZSWM2	231..274	CDD:319400	24/42 (57%)
		modified RING-H2 finger (C3H2C2D-type)	232..273	CDD:319400	23/40 (58%)
rnf13	NP_001008015.1	PA_C_RZF_like	24..181	CDD:239038	56/172 (33%)
rnf13	NP_001008015.1	RING_Ubox	239..284	CDD:388418	25/46 (54%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	71	1.000	Domainoid score	I4019
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	146	1.000	Inparanoid score	I2056
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1487241at2759
OrthoFinder	1	1.000	-	-		FOG0001489
OrthoInspector	1	1.000	-	-		mtm3637
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X670
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	7	7.060