DRSC/TRiP Functional Genomics Resources

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Protein Alignment AT1G22670 and RNF167

DIOPT Version :9

Sequence 1:NP_173681.1 Gene:AT1G22670 / 838873 AraportID:AT1G22670 Length:422 Species:Arabidopsis thaliana
Sequence 2:NP_001357232.1 Gene:RNF167 / 26001 HGNCID:24544 Length:374 Species:Homo sapiens


Alignment Length:343 Identity:106/343 - (30%)
Similarity:159/343 - (46%) Gaps:74/343 - (21%)


- Green bases have known domain annotations that are detailed below.


plant    29 DSNITRSFVDMEADFSPSVTTVE-TGVVYVAEPLNACRNLRNKPEQSPYGTSPLVLIIRGGCSFE 92
            |.|.:..|.|:.|.|..:::... .|.:..|.|.|||..:...|.....|:..:.|:.|..|:|:
Human    31 DHNASMDFADLPALFGATLSQEGLQGFLVEAHPDNACSPIAPPPPAPVNGSVFIALLRRFDCNFD 95

plant    93 YKVRNAQRSGFKAAIVYDNVDRNFLSAMGGDSDGIK----IQAVFVMKRAGEMLKK-YAGSEEME 152
            .||.|||::|:.||:|: ||:.|.|..|..:|:.|:    |.:||:.:|:.|.|:. :...:...
Human    96 LKVLNAQKAGYGAAVVH-NVNSNELLNMVWNSEEIQQQIWIPSVFIGERSSEYLRALFVYEKGAR 159

plant   153 VMLVPPNTEDSVWSL--YASIALILSLAIFCVMVTCVFFYRYCSTIRNSTSQFNGMCRRTVKAMP 215
            |:|||.||....:.|  :..|..:|.||:..||:.....:|       ...|.|.:.:..:|.:|
Human   160 VLLVPDNTFPL
GYYLIPFTGIVGLLVLAMGAVMIARCIQHR-------KRLQRNRLTKEQLKQIP 217

plant   216 SVTF----------------TCAKIDNTTGF------SCAICLEDYIVGDKLRVLPCSHKFHVAC 258
            :..:                ||  :.::|||      .|||||::|..|||||||||:|.:|..|
Human   218 THDYQKALNSSMFCPDLILPTC--LISSTGFVGDQYDVCAICLDEYEDGDKLRVLPCAHAYHSRC 280

plant   259 VDSWLISWRTFCPVCKR---------------------DARTTADEPLATESTPFLSSSIATSSL 302
            ||.||...|..||:||:                     |.....|.| |:|.||.|.|       
Human   281 VDPWLTQTRKTCPICKQPVHRGPGDEDQEEETQGQEEGDEGEPRDHP-ASERTPLLGS------- 337

plant   303 VCIDSPPLGSSV-SFSPA 319
                ||.|.:|. |.:||
Human   338 ----SPTLPTSFGSLAPA 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AT1G22670NP_173681.1 PA_C_RZF_like 17..160 CDD:239038 44/136 (32%)
HRD1 <163..>314 CDD:227568 56/195 (29%)
mRING-H2-C3H2C2D_ZSWM2 231..274 CDD:319400 25/42 (60%)
modified RING-H2 finger (C3H2C2D-type) 232..273 CDD:319400 25/40 (63%)
RNF167NP_001357232.1 PA_C_RZF_like 20..170 CDD:239038 46/139 (33%)
RING-H2_RNF167 252..297 CDD:319711 26/44 (59%)
RING-H2 finger (C3H2C3-type) 254..295 CDD:319711 25/40 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 71 1.000 Domainoid score I4059
eggNOG 1 0.900 - - E1_KOG4628
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41046
Inparanoid 1 1.050 136 1.000 Inparanoid score I2220
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 1 1.000 - - FOG0001489
OrthoInspector 1 1.000 - - mtm1436
orthoMCL 1 0.900 - - OOG6_103040
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X670
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.730

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