DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AT1G19450 and CG33282

DIOPT Version :9

Sequence 1:NP_173377.1 Gene:AT1G19450 / 838529 AraportID:AT1G19450 Length:488 Species:Arabidopsis thaliana
Sequence 2:NP_001097067.1 Gene:CG33282 / 2768939 FlyBaseID:FBgn0053282 Length:460 Species:Drosophila melanogaster


Alignment Length:482 Identity:143/482 - (29%)
Similarity:242/482 - (50%) Gaps:56/482 - (11%)


- Green bases have known domain annotations that are detailed below.


plant    33 SSMLESSQVIRDSSISVLACVL--IVALGPIQFGFTCGYSSPTQAAITK--------DLGLTVSE 87
            ::.|::|.:.:.:...:||.|:  |:..|   .|...|:.|||   :||        |..:.:::
  Fly     2 ATFLKNSLLQQKTRYQLLATVIVNIITFG---HGVGVGWLSPT---LTKIQTADSPLDFEVNLAQ 60

plant    88 YSVFGSLSNVGAMVGAIASGQIAEYVGRKGSLMIAAIPNIIGWLSISFAKDTSFLYMGRLLEGFG 152
            .|..||:..:.::.|.:....:.|..|||..|.:.|.|....|:.|..|.:..:||..|.|.||.
  Fly    61 ISWLGSMLGLDSLCGNLTIAMLIERAGRKFCLYLMAGPYACIWILIYCASNVYYLYAARFLCGFT 125

plant   153 VGIISYTVPVYIAEIAPQTMRGALGSVNQLSVTIGIMLAYLLGLFVPWRILAVLG-VLPCTLLIP 216
            .|.....||::|:|:|...:||||.|:..|||.:||:..|:|..::.:.::..|. :||....|.
  Fly   126 GGAGYLVVPIFISEVADSNIRGALTSMVMLSVDLGILAGYILSTYLAYHVVPFLAIILPVAYFIA 190

plant   217 GLFFIPESPRWLAKMGLTDDFETSLQVLRGFETDI---TVEVN--EIKRSVASSSKRSA--VRFV 274
            .: .:||:..:|.|.......|.|.:..|...:.|   |.:||  |::.:|.|...|:|  :.:.
  Fly   191 NI-MLPETAPYLLKKSQLAAAENSFRYYRNQRSAICEQTSKVNFEELRTAVLSQQTRNATPLSYK 254

plant   275 DLKRRRYYFPLMVGIGLLALQQLG----GINGVLFYSSTIFESAG-VTSSNVATFGVGVVQVVAT 334
            ||..:    |.:.|.....:..||    |:...:.|.|.||:::| |...|.||..:|:||:|..
  Fly   255 DLTTK----PALKGFAASIVLSLGYQFSGVFSFINYMSDIFKASGSVVDVNTATIIIGLVQIVGV 315

plant   335 GIATWLVDKAGRRLLLMISSIGMTISLVIVAVAFYLKEFVSPDSNMYNILSMVSVVGVVAMVISC 399
            ..:|.|||..|||:|::||::|:.|..:......||       :.:|: ||..:.:.:|.|:|.|
  Fly   316 YTSTILVDIVGRRVLMLISTMGVGIGCIAFGCFTYL-------AKIYD-LSDFNWLPLVLMIIIC 372

plant   400 ---SLGMGPIPWLIMSEILPVNIKGLAGSIATLLNWFVSWLVTMTAN----MLLAWSSGGTFTLY 457
               ::|:..|.:|::.|:.||.|:.||.|::.:   |:|.||..|..    ||..|  |.:||::
  Fly   373 YVANIGLIGIFFLVLVELFPVKIRSLATSLSVI---FLSLLVFGTLKLFPLMLHYW--GISFTMW 432

plant   458 ALVCGFTVVFVSLW--VPETKGKTLEE 482
            .......:.|...|  :.|||||::.|
  Fly   433 FSAASALLTFFYFWLFLQETKGKSMIE 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AT1G19450NP_173377.1 MFS_GLUT6_8_Class3_like 50..482 CDD:340916 140/463 (30%)
CG33282NP_001097067.1 MFS 21..448 CDD:119392 133/450 (30%)
MFS_1 53..409 CDD:284993 111/371 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53651
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

Return to query results.
Submit another query.