Sequence 1: | XP_017455748.1 | Gene: | Fat1 / 83720 | RGDID: | 621254 | Length: | 4624 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001285551.1 | Gene: | ds / 33245 | FlyBaseID: | FBgn0284247 | Length: | 3556 | Species: | Drosophila melanogaster |
Alignment Length: | 3888 | Identity: | 992/3888 - (25%) |
---|---|---|---|
Similarity: | 1518/3888 - (39%) | Gaps: | 928/3888 - (23%) |
- Green bases have known domain annotations that are detailed below.
Rat 389 LVKAIPSYSHLRYVFKSTPGKPKFGLNH----NTGLISILEPIKRQHTTHFELEVTTSDRRASTK 449
Rat 450 VVVKVVGTNSNPPEFTQTSYKASFDENAPVGTPVMRVSAVDPDEGENG----------YVTYSIA 504
Rat 505 NLNHVPFVIDHFTGAVSTSENLDYELMPRVYMLRIRASDWGLPYRREVEVLATITLNNLNDNTPL 569
Rat 570 FEKTNC-----EGTIPRDLGVGEQITTVSAIDADELQLVRYQIEAGNELDLFGLNPSSGVLSLKH 629
Rat 630 SLMDGLGAKVSFHSLRITATDGENFATPLYINLTVAASRKPVNLRCEETGVAKMLAEKLLQANKL 694
Rat 695 HHQGDAEDIFFDSHSVNAHAPQFRGSLPTGIEVKEDLPVGASILFMNATDLDSGFNGKLVYAISG 759
Rat 760 GNDDSCFTVDMETGMLKVLSPLDREVTDKYTLNITVYDLGIPQRAAWRLLDVTVLDANDNAPEFL 824
Rat 825 QESYFVEVSEDKEINSEIIQVEATDKDLGPSGHVTYAI---LTDTEK-FAIDRVTGVVKIIQPLD 885
Rat 886 REVQRVHYLKIEARDQATEEPWLSSTVLLKVSLDDVNDNPPR----FIPPSYSVKVREDLPEGTI 946
Rat 947 IMWLEAHDPDVGQSSQVRYS----LLDHGEGHFDVDKLSGAVRIV---QQLDFEKKQLYNLTVRA 1004
Rat 1005 KDKGKPASLSSTGYVEVEVVDVNENLHAPVFSSFVEKGTVKEDVPMGSSVMTVSAHDEDTGRDGE 1069
Rat 1070 IRYSIRDGSGVGV--FRIDEETGVIETSDRLDRESTSHYWLTVYATDQGVVPLSSFIEVYIEVED 1132
Rat 1133 VNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSSDKLTYRITSGNPQGF-----FSIHP 1192
Rat 1193 KTGLITTTSRKLDREQQDEHILEVTVTDNGVPPRSTIARVIVKILDENDNRPQFLQKFYKIRLPE 1257
Rat 1258 REKADGDRSAKREPLYRVIAADKDEGPNAELSYSIEEGNEHGRFSIEPKTG---VVSSKKFSAAG 1319
Rat 1320 E-YDILSIKAIDNGRPQKSSTTRLHIEWISKPKPSLEPISFEESVFSFTVMESDPVAHMIGVISV 1383
Rat 1384 EPPGMPLWFDIIGDALAREAFYIFQMTCDLNCTAEGGNYDSHFDVDKGTGTIIVAKPLDAEQKSS 1448
Rat 1449 YNLTVEATDGTSTIL--TQVLIKVIDTNDHRPQFSTSKYEVSVPEDTEPETEILQISAVDRD--E 1509
Rat 1510 KNKLIYTLQSSIDPASLKKFRLDPATGALYTSEKLDHEAIHQHVLTVMVRDQDVPVKRNFARIIV 1574
Rat 1575 NVSDMNDHSPWFTSSSYEGRVYESAAVGSVVLQVTALDRDKGRNAEVLY------------SIES 1627
Rat 1628 GNIGNSFTIDPILGSIKTARELDRSHQVDYDLMVKATDKGEPPMSEMTSVRISVTVADNASPKFT 1692
Rat 1693 SKEYSAEISEAIRIGSFVGMVSAH-----SQSSVMYEVKDGNIGDAFNINPHSGSIVTQRALDFE 1752
Rat 1753 TLPIYTLTV----QGTNMAGLSTNTTVVVHIQDENDNPPAFTRAEYSGFISESASVNSVVLTDKN 1813
Rat 1814 VP-----LVIRATDADRESNALLVYQIV---EPSVHNYFAIDPTTGAIHTVLSLDYEETRVFHFT 1870
Rat 1871 VQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFSKSLYEASLLLPTYKGVNVITVNATDADSRAF 1935
Rat 1936 SQLIYSITKGNIGEKFSMDHKTGTIAIQNTTQLRSRYELTVRASDGRFTSVASVRINVKESRESP 2000
Rat 2001 LKFTQDAYSAVVKENSTEAKTLAVITAIGNPINEPLFYRILNPDRRFKISHTSGVLSTTGIPFDR 2065
Rat 2066 EQQETF---VVVVEVTKEREPSAVAHVVVKVTVEDQNDNAPVFVNLPYYAVVKVDAEVGHVIRHV 2127
Rat 2128 TAIDRDSGRNGDVHYYLKEHHDHFEIGPSGDISLKKQFEHDTLNKEYLVTVVAKDGGNPAFSAEV 2192
Rat 2193 LVPITVMNKAMPVFEKAFYSAEIPENVQTHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNT 2257
Rat 2258 GVINVIAPLDFESHPAYKLSIRATDSLTGA----HAEVFVDIVVEDINDNPPVFVQ------QSY 2312
Rat 2313 STTLSEASVIGAPILQVRATDSDSEPNRGISYQLIGNHSKSHDHFHIDSHTGLISLVRAL----- 2372
Rat 2373 DYEQFQQHKLLVRAVDGGMP-PLSSDVVVTVDVTDLNDNPPLFEQQVYEARISEHAAHGHFVMCV 2436
Rat 2437 KACDADRSDLDRLEYSILSGNDHKSFVIDGETGIITLSNPRRHTLKPFYSLNVSVSDGVFRSS-- 2499
Rat 2500 ------------------------ARVNVTVMGGNLHSPVFHQNE-YEVELAENAP---LHTLVV 2536
Rat 2537 QVKATDRDSGIYGHLTYHLVNDFAKDRFYVNDGGQVFTLERLDREAPAEKVISVRLMAKDAG--- 2598
Rat 2599 GKVAFCTVNVILTDDNDNAPQFRSTKYEVNVGSSAAKGTSVVKVFASDADEGSNADVTYAIEADS 2663
Rat 2664 ESVEENLEINQLTGLITTKESLIGLENEFFTFFVRAVDNGSPPKESVVPVYVKILPPEVQLPRFS 2728
Rat 2729 EPFYTYSISEDMPIGTEIDLIRVEHSGTVLYTLVKGNTPESNRDEF-FVIDRQSGRLKLEKSLDH 2792
Rat 2793 ETTKWYQFSILARCTLDD--YEV-VASIDVSIQVKDANDNSPVLESNPYEAFIVENLPAGSRVIQ 2854
Rat 2855 VRASDLDSGVNGQVMYSLDQSQDADIIESFAINMETGWITTLKELDHEERASYQIKVVASDHGEK 2919
Rat 2920 VQLSSTAIVDVTVTDVNDSPP--RFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVSYFI 2982
Rat 2983 TGGDALGQFAVENMQNDWRVYVKKPLD------------------------------------RE 3011
Rat 3012 QK----DSYLLT------------VTATDGTF-SSKARVEVKVLDANDNSPVCERTAYSDAIPED 3059
Rat 3060 ALPGKLVMQVSATDADIRSNAEITYTLF-GSGAEKFKLNPD-TGELRTLALLDREEQAVYHLLVK 3122
Rat 3123 ATDGG--GRSCQATIVLTLEDVNDNTPEFTADPYAITVFENTEPGTPLTRVQATDADA--GLNRK 3183
Rat 3184 I-SYSLLDSAD-GQFSINEQSGILQLEKHLDRELQAVYTLTLKAADQGLPRKLTATGTVVVSVLD 3246
Rat 3247 INDNPPVFEYREYGA---------TVSEDIVIGTEVLQVYAASRDIEANAEITYAIISGNEHGKF 3302
Rat 3303 SIDSKTGAIFIIENLD-----YESSHGYYLTVEATDGGTPSLSDVATVNINITDINDNSPVFSQD 3362
Rat 3363 SYTTVVSEDAALEQPVITIMADDADGPSNSHILYSIIEGNQGSPFTIDPVRGEIKVTKPLDRETI 3427
Rat 3428 SGYTLTVQAADNGNPPRVNT------TTVNIDVSDVNDNAPLFSRD-NYSVIIQENKPVGFSVLK 3485
Rat 3486 LVVTDKDSSHNGPPFS---FAIVSGNDDNMFEVNQHGVLLTAATVKRKVKDH------YLLHVKV 3541
Rat 3542 ADNGKPQ-LSSLTHIDIRVIEESIHPPAILPLEIFITASGE-EYSGGVIGKIHATDQD--VYDTL 3602
Rat 3603 TYSLDPHMDG-----LFSVSSTGGKLIAHRKLDIGQ---YLLNVSVTD--GKFTTVADITVHIQ- 3656
Rat 3657 --QVTQEMLNHTIAIRF----ANLTPEEFVGDYWRNFQRALRNILGIRKNDIQI-----VSLQPS 3710
Rat 3711 EPHSHL------------------------------DVLLFVEKSGG----------TQISTKQL 3735
Rat 3736 LH----------KINSSVTDIEEIIGVRILDVFQKLCAGLDCPWKFCDEKVSVDENIMSTHSTA- 3789
Rat 3790 ------RLSFVTPRHHRTAVCLCKDGTCPPVHQGCEDNPCPAGSECVADPREEKYSCVCPGGGFA 3848
Rat 3849 KCPGSSSITFTGSSFVKYRLMENENRLEMKLTMRLRTYSSHAVVMYARGTDYSILEIHTGRLQYK 3913
Rat 3914 FDCGSGPGIVSVQSIQVNDGQWHAVSLEVEGNY-AKL-VLDEVHTASGTAPGA 3964 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Fat1 | XP_017455748.1 | Cadherin_repeat | 39..145 | CDD:206637 | |
Cadherin_repeat | 154..253 | CDD:206637 | |||
Cadherin | 278..357 | CDD:421759 | |||
Cadherin_repeat | 372..>444 | CDD:206637 | 10/58 (17%) | ||
Cadherin_repeat | 468..566 | CDD:206637 | 27/107 (25%) | ||
Cadherin_repeat | 576..663 | CDD:206637 | 19/86 (22%) | ||
Cadherin_repeat | 725..819 | CDD:206637 | 17/93 (18%) | ||
Cadherin_repeat | 827..924 | CDD:206637 | 36/100 (36%) | ||
Cadherin_repeat | 932..1016 | CDD:206637 | 28/90 (31%) | ||
Cadherin_repeat | 1043..1136 | CDD:206637 | 37/94 (39%) | ||
Cadherin_repeat | 1144..1242 | CDD:206637 | 27/102 (26%) | ||
Cadherin_repeat | 1251..1345 | CDD:206637 | 32/97 (33%) | ||
Cadherin_repeat | 1363..1476 | CDD:206637 | 32/114 (28%) | ||
Cadherin_repeat | 1485..1582 | CDD:206637 | 29/98 (30%) | ||
Cadherin_repeat | 1590..1686 | CDD:206637 | 36/107 (34%) | ||
Cadherin_repeat | 1695..1785 | CDD:206637 | 31/98 (32%) | ||
Cadherin_repeat | 1793..1898 | CDD:206637 | 33/112 (29%) | ||
Cadherin_repeat | 1919..1994 | CDD:206637 | 6/74 (8%) | ||
Cadherin_repeat | 2008..2101 | CDD:206637 | 24/95 (25%) | ||
Cadherin_repeat | 2109..2198 | CDD:206637 | 20/88 (23%) | ||
Cadherin_repeat | 2211..2303 | CDD:206637 | 16/95 (17%) | ||
Cadherin_repeat | 2311..2410 | CDD:206637 | 31/104 (30%) | ||
Cadherin_repeat | 2418..2512 | CDD:206637 | 30/119 (25%) | ||
Cadherin_repeat | 2520..2616 | CDD:206637 | 23/102 (23%) | ||
Cadherin_repeat | 2625..2718 | CDD:206637 | 16/92 (17%) | ||
Cadherin_repeat | 2732..2829 | CDD:206637 | 24/100 (24%) | ||
Cadherin_repeat | 2837..2937 | CDD:206637 | 27/99 (27%) | ||
Cadherin_repeat | 2946..3043 | CDD:206637 | 24/149 (16%) | ||
Cadherin_repeat | 3056..3145 | CDD:206637 | 34/92 (37%) | ||
Cadherin_repeat | 3153..3250 | CDD:206637 | 32/100 (32%) | ||
Cadherin_repeat | 3258..3355 | CDD:206637 | 25/110 (23%) | ||
Cadherin_repeat | 3363..3460 | CDD:206637 | 29/102 (28%) | ||
Cadherin_repeat | 3469..3560 | CDD:206637 | 26/100 (26%) | ||
Cadherin_repeat | 3585..3658 | CDD:206637 | 23/87 (26%) | ||
LamG | 3878..4009 | CDD:214598 | 24/89 (27%) | ||
EGF_CA | 4040..4074 | CDD:238011 | |||
EGF_CA | 4077..4112 | CDD:238011 | |||
EGF | 4117..4147 | CDD:394967 | |||
EGF_CA | 4151..4187 | CDD:238011 | |||
ds | NP_001285551.1 | CA | 111..172 | CDD:214520 | 19/69 (28%) |
Cadherin_repeat | 178..282 | CDD:206637 | 37/249 (15%) | ||
Cadherin_repeat | 291..389 | CDD:206637 | 36/99 (36%) | ||
Cadherin_repeat | 406..500 | CDD:206637 | 29/98 (30%) | ||
Cadherin_repeat | 509..607 | CDD:206637 | 37/97 (38%) | ||
Cadherin_repeat | 616..711 | CDD:206637 | 27/101 (27%) | ||
Cadherin_repeat | 719..820 | CDD:206637 | 33/102 (32%) | ||
Cadherin_repeat | 832..927 | CDD:206637 | 32/113 (28%) | ||
Cadherin_repeat | 937..1032 | CDD:206637 | 29/97 (30%) | ||
Cadherin_repeat | 1040..1149 | CDD:206637 | 36/108 (33%) | ||
Cadherin_repeat | 1158..1252 | CDD:206637 | 31/97 (32%) | ||
Cadherin_repeat | 1263..1361 | CDD:206637 | 34/99 (34%) | ||
Cadherin_repeat | 1369..1481 | CDD:206637 | 32/166 (19%) | ||
Cadherin_repeat | 1489..1598 | CDD:206637 | 36/197 (18%) | ||
Cadherin_repeat | 1614..1710 | CDD:206637 | 30/97 (31%) | ||
Cadherin_repeat | 1723..1843 | CDD:206637 | 30/119 (25%) | ||
Cadherin_repeat | 1853..1948 | CDD:206637 | 23/100 (23%) | ||
Cadherin_repeat | 1957..2053 | CDD:206637 | 40/207 (19%) | ||
Cadherin_repeat | 2061..2154 | CDD:206637 | 27/94 (29%) | ||
Cadherin_repeat | 2170..2318 | CDD:206637 | 24/149 (16%) | ||
Cadherin_repeat | 2326..2424 | CDD:206637 | 34/97 (35%) | ||
Cadherin_repeat | 2434..2528 | CDD:206637 | 32/97 (33%) | ||
Cadherin_repeat | 2549..2641 | CDD:206637 | 23/94 (24%) | ||
Cadherin_repeat | 2652..2748 | CDD:206637 | 29/102 (28%) | ||
Cadherin_repeat | 2758..2858 | CDD:206637 | 27/105 (26%) | ||
Cadherin_repeat | 2866..2960 | CDD:206637 | 24/94 (26%) | ||
Cadherin_repeat | 2985..3071 | CDD:206637 | 14/98 (14%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100175 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |