DRSC/TRiP Functional Genomics Resources

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Protein Alignment CASP4 and Decay

DIOPT Version :10

Sequence 1:NP_001216.1 Gene:CASP4 / 837 HGNCID:1505 Length:377 Species:Homo sapiens
Sequence 2:NP_477462.1 Gene:Decay / 42008 FlyBaseID:FBgn0028381 Length:308 Species:Drosophila melanogaster


Alignment Length:246 Identity:69/246 - (28%)
Similarity:104/246 - (42%) Gaps:44/246 - (17%)


- Green bases have known domain annotations that are detailed below.


Human   101 ESTDALKLC--PHEEF----LRLCKERAEEIYPIKERNNRTRLALIICNTEFDHLPPRNGADFDI 159
            :..||.|:.  |..|.    :.:.:...|:.|   |...|..:|||:.:.:......|.|.:.|.
  Fly    18 DKADATKIAHTPTSELDLKRIIISRPTNEDTY---ENCARAGIALILNHKDVKGQKQRVGTERDR 79

Human   160 TGMKELLEGLDYSVDVEENLTARDMESALRAFATRPEHKSSDSTFLVLMSHGILEGICGTVH--D 222
            ..|:..|:|..:.|...::||..::...|:..| |.:|..:|...|.:||||..    |.|:  |
  Fly    80 DDMEATLQGFGFDVRTFDDLTFSEINDTLKEVA-REDHSQNDCFVLAVMSHGTE----GKVYAKD 139

Human   223 EKKPDVLLYDTIFQIFNNRNCLSLKDKPKVIIVQACRGANRGELWVRDSPASLEVASSQSS---- 283
            ...|    .:.::..|...||.:||:|||:..:|||||||            ||.|...||    
  Fly   140 MSYP----VERLWNPFLGDNCKTLKNKPKLFFIQACRGAN------------LEKAVEFSSFAVM 188

Human   284 --ENLEEDA------VYKTHVEKDFIAFCSSTPHNVSWRDSTMGSIFITQL 326
              |.:.|.|      .|......|.:.|.|:.....|:|:...||.||..|
  Fly   189 TRELVPEPAAAVQPITYAIPSTADILVFYSTFDKFFSFRNVDDGSWFIQSL 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CASP4NP_001216.1 Required for LPS-binding. /evidence=ECO:0000250|UniProtKB:P70343 1..59
CARD_CASP1-like 5..81 CDD:260036
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 84..104 0/2 (0%)
CASc 126..375 CDD:214521 63/215 (29%)
DecayNP_477462.1 CASc 54..302 CDD:237997 61/207 (29%)
Blue background indicates that the domain is not in the aligned region.

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