Protein Alignment RMR1 and YBR062C

DIOPT Version :9

• Sequence 1: NP_201417.1
• Gene: RMR1 / 836748
• AraportID: AT5G66160
• Length: 310
• Species: Arabidopsis thaliana
• Sequence 2: NP_009618.2
• Gene: YBR062C / 852354
• SGDID: S000000266
• Length: 180
• Species: Saccharomyces cerevisiae
• Alignment Length: 68
• Identity: 21/68 - (30%)
• Similarity: 37/68 - (54%)
• Gaps: 4/68 - (5%)

plant   227 KAGETCAICLEDYRFGE---SLRLLPCQHAFHLNCIDSWLTKWGTSCPVCKHDIRTETMSSEVHK 288
            ||.:.|:||..:|...|   .:.|..|.|.|.|.|:..||:: .|:||:|:.::....:.:|:..
Yeast   104 KATDNCSICYTNYLEDEYPLVVELPHCHHKFDLECLSVWLSR-STTCPLCRDNVMGHRIINEIDT 167

plant   289 RES 291
            .|:
Yeast   168 TEA 170

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RMR1	NP_201417.1	PA_C_RZF_like	28..166	CDD:239038
		RING	231..277	CDD:238093	17/48 (35%)
YBR062C	NP_009618.2	RING_Ubox	109..153	CDD:418438	16/44 (36%)
		RING-H2 finger (C3H2C3-type)	109..152	CDD:319361	16/43 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	54	1.000	Domainoid score	I2894
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.000