Protein Alignment RMR1 and Rnf167

DIOPT Version :9

• Sequence 1: NP_201417.1
• Gene: RMR1 / 836748
• AraportID: AT5G66160
• Length: 310
• Species: Arabidopsis thaliana
• Sequence 2: NP_001008362.1
• Gene: Rnf167 / 360554
• RGDID: 1305972
• Length: 349
• Species: Rattus norvegicus
• Alignment Length: 317
• Identity: 99/317 - (31%)
• Similarity: 154/317 - (48%)
• Gaps: 36/317 - (11%)

plant     3 LVVSSCLLVAAPFLSSLLRVSLATVVLNSISASFADLPAKFDGSVTKNGICGALYVADPLDGCSP 67
            :||::.|..||| :..|:|   ||...|: |..||||||.|..:::..|:.|.|..|.|.:.|||
  Rat    10 VVVATVLWGAAP-IRGLIR---ATSEHNA-SMDFADLPALFGATLSDEGLQGFLVEAHPENACSP 69

plant    68 LLHAAASNWTQHRTTKFALIIRGECSFEDKLLNAQNSGFQAVIVYDNIDNEDLIVMKVN----PQ 128
            :  |...:...:.:...||:.|.:|:|:.|:||||.:|:.|.:|: |:::.:|:.|..|    .|
  Rat    70 I--APPPSAPVNGSVFIALLRRFDCNFDLKVLNAQKAGYGAAVVH-NVNSNELLNMVWNSEEIQQ 131

plant   129 DITVDAVFVSNVAGEILRKYARGRDGECCLNPPDRGSAWTVLAISFFSL--LLIV---TFLLIAF 188
            .|.:.:||:...:.|.||.......|...|..||.........|.|..:  ||::   |.|::
  Rat   132 QIWIPSVFIGERSAEYLRALFVYEKGARVLLVPDNSFPLGYYLIPFTGIVGLLVLAMGTVLIV-- 194

plant   189 FAPRHWTQWRGRHTRTIRLDAKLVHTLPCFTFTDSAHHKAGETCAICLEDYRFGESLRLLPCQHA 253
                ...|.|.|..|. ||..:.:..:|...:.....:   :.|||||::|..|:.||:|||.||
  Rat   195 ----RCIQHRKRLQRN-RLTKEQLKQIPTHDYQKGDEY---DVCAICLDEYEDGDKLRILPCAHA 251

plant   254 FHLNCIDSWLTKWGTSCPVCKHDI---------RTETMSSEVHKRESPRTDTSTSRF 301
            :|..|:|.|||:...:||:||..:         ..||...|....|....|...|.:
  Rat   252 YHSRCVDPWLTQTRKTCPICKQPVHRGPGDEEQEEETQGQEEEGDEGEPRDQPASEW 308

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RMR1	NP_201417.1	PA_C_RZF_like	28..166	CDD:239038	46/141 (33%)
		RING	231..277	CDD:238093	24/45 (53%)
Rnf167	NP_001008362.1	PA_C_RZF_like	20..170	CDD:239038	52/157 (33%)
		RING-H2_RNF167	228..273	CDD:319711	23/44 (52%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	271..349		8/38 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	72	1.000	Domainoid score	I3934
eggNOG	1	0.900	-	-		E1_KOG4628
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	138	1.000	Inparanoid score	I2173
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1487241at2759
OrthoFinder	1	1.000	-	-		FOG0001489
OrthoInspector	1	1.000	-	-		mtm2609
orthoMCL	1	0.900	-	-		OOG6_103040
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X670
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	11	10.730