DRSC/TRiP Functional Genomics Resources

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Protein Alignment HTA6 and His2A:CG33829

DIOPT Version :9

Sequence 1:NP_200795.1 Gene:HTA6 / 836109 AraportID:AT5G59870 Length:150 Species:Arabidopsis thaliana
Sequence 2:NP_001027326.1 Gene:His2A:CG33829 / 3772447 FlyBaseID:FBgn0053829 Length:124 Species:Drosophila melanogaster


Alignment Length:121 Identity:92/121 - (76%)
Similarity:103/121 - (85%) Gaps:0/121 - (0%)


- Green bases have known domain annotations that are detailed below.


plant    13 GRKPPGAPKTKSVSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAG 77
            ||...|..|.|:.|:|.:||||||||||.|.|:||.||:|:|.|||||:|||:||||||||||||
  Fly     3 GRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAG 67

plant    78 NAARDNKKSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLPKKSATK 133
            ||||||||:|||||||.|||||||||.|||||||||.|||||||.:||||||:..|
  Fly    68 NAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HTA6NP_200795.1 H2A 15..129 CDD:238029 87/113 (77%)
His2A:CG33829NP_001027326.1 PTZ00017 16..124 CDD:185399 87/108 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4215
eggNOG 1 0.900 - - E1_COG5262
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H134465
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53554
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm981
orthoMCL 1 0.900 - - OOG6_100077
Panther 1 1.100 - - O PTHR23430
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.820

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