DRSC/TRiP Functional Genomics Resources

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Protein Alignment PHOT2 and Elk

DIOPT Version :10

Sequence 1:NP_851210.1 Gene:PHOT2 / 835926 AraportID:AT5G58140 Length:915 Species:Arabidopsis thaliana
Sequence 2:NP_477009.1 Gene:Elk / 37047 FlyBaseID:FBgn0011589 Length:1284 Species:Drosophila melanogaster


Alignment Length:476 Identity:104/476 - (21%)
Similarity:181/476 - (38%) Gaps:142/476 - (29%)


- Green bases have known domain annotations that are detailed below.


plant   380 LATTLERIEKNFVISDPRLPDNPIIFASDSFLELTEYSREEIL--GRNCRFLQGPETDQATVQKI 442
            :||..:....|||:.:.:...|||::.||.|::||.|||.:|:  |.:|.||.||:|.:...|:|
  Fly    18 IATRFDGTHSNFVLGNAQANGNPIVYCSDGFVDLTGYSRAQIMQKGCSCHFLYGPDTKEEHKQQI 82

plant   443 RDAIRDQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVEPLQNRLSERT 507
            ..::.::.|:.:::|.|.|.|..||.||.:.|::::|.::..|:....| ..|.:.|:..::|  
  Fly    83 EKSLSNKMELKLEVIFYKKEGAPFWCLFDIVPIKNEKRDVVLFLASHKD-ITHTKMLEMNVNE-- 144

plant   508 EMQSSKLVKATATNVDEAVRE-----------LP--------DANTRPEDLWAAHSKPVYPLPHN 553
              :...:...||..:....|.           ||        |.:|...:   .::..| |...|
  Fly   145 --ECDSVFALTAALLGARFRAGSNAGMLGLGGLPGLGGPAASDGDTEAGE---GNNLDV-PAGCN 203

plant   554 KESTSWKAIKKIQASGETVGLHHFKPIKPLGSGDTGSVHLVELKGTGELYAMKA---MEKTMMLN 615
            ......:|: ..|.||      |:||.|       |.|......|...:::.:|   ..||..:.
  Fly   204 MGRRRSRAV-LYQLSG------HYKPEK-------GGVKTKLKLGNNFMHSTEAPFPEYKTQSIK 254

plant   616 RNKAHRACIEREIISLLDHPFLPTLYASFQTSTHVCLITDFCPGGELFALLDRQPMKILTEDSAR 680
            :::.           :|.|      |..|:.      |.|:.               ||.   |.
  Fly   255 KSRL-----------ILPH------YGVFKG------IWDWV---------------ILV---AT 278

plant   681 FYAAEVVIGLEYLHCLGIVYRDLKPENILLKKDGHIVLADFDLSFMTTCTPQLIIPAAPSKRRRS 745
            ||.|.:|   .|........|..|..:::::.   :.:.|..|:|.|                  
  Fly   279 FYVALMV---PYNAAFAKADRQTKVSDVIVEA---LFIVDILLNFRT------------------ 319

plant   746 KSQPLPTFVAEPSTQSNSFVGTEEYIAPEIITGAGHTSAIDWWALGILL---YEMLYGRTPFRGK 807
                  |||    ::....|...:.||...:.|        |:||.:|.   ::.||....:.|:
  Fly   320 ------TFV----SRKGEVVSNSKQIAINYLRG--------WFALDLLAALPFDHLYASDLYDGE 366

plant   808 N---------RQKTFANILHK 819
            :         |....|.:|.|
  Fly   367 DSHIHLVKLTRLLRLARLLQK 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHOT2NP_851210.1 PRK13559 128..>241 CDD:237427
PRK13557 392..>514 CDD:237425 38/123 (31%)
STKc_phototropin_like 575..888 CDD:270726 48/260 (18%)
ElkNP_477009.1 PAS_9 40..133 CDD:463873 33/93 (35%)
PLN03192 270..>650 CDD:215625 33/178 (19%)
cNMP 586..716 CDD:197516
Blue background indicates that the domain is not in the aligned region.

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