DRSC/TRiP Functional Genomics Resources

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Protein Alignment TAAR8 and chrm1

DIOPT Version :9

Sequence 1:NP_444508.1 Gene:TAAR8 / 83551 HGNCID:14964 Length:342 Species:Homo sapiens
Sequence 2:XP_004913717.1 Gene:chrm1 / 100490434 XenbaseID:XB-GENE-22061118 Length:521 Species:Xenopus tropicalis


Alignment Length:490 Identity:101/490 - (20%)
Similarity:166/490 - (33%) Gaps:185/490 - (37%)


- Green bases have known domain annotations that are detailed below.


Human     1 MTSNFSQPVVQLCYEDVNGSCIETPYSPGSRVILYTAFSFGSLLAVFGNLLVMTSVLHFKQLHSP 65
            :|||.::.     |:.:.|..:      ...|::.......||:.|.||:||:.:......|.:.
 Frog    28 LTSNATEE-----YDPLGGHAV------WEVVLIVITTGILSLVTVIGNVLVLLAFKVNSDLKTV 81

Human    66 TNFLIASLACADFLVGVTVMLFSMVRTVESCWYFGAKFCTLHSCCDVAFCYSSVLHLCFICIDRY 130
            .|:.:.||||||.::|...|.......|...|..|...|.|....|.....:||::|..|..|||
 Frog    82 NNYFLLSLACADIIIGALSMNLYTTYIVMGRWALGPVSCDLWLALDYVASNASVMNLLIISFDRY 146

Human   131 IVVTDPLVYATKFTVSVSGICISVSWILP-LTYSGAVFY----TGVNDDGLEELVSALNCV--GG 188
            ..:|.||.|..|.|...:.|.|.::|.:. :.::.|:.:    .|      |..|.|.:|.  ..
 Frog   147 FSITRPLTYRAKRTPRRAAIMIGMAWFISFVLWAPAIIFWQYIVG------ERTVEATDCYIQFF 205

Human   189 CQIIVSQGWVLIDFLLFFIPTLVMIILYSKIF--------------------------------- 220
            .|.|::.|..:   ..|::|..:|||||.:::                                 
 Frog   206 SQPIITFGTAI---AAFYLPVTIMIILYWRVYRETENRSKELAGLQGSGTDHTSHPLALGSVRSG 267

Human   221 ------------------------------------------------------------LIAKQ 225
                                                                        |.:..
 Frog   268 SSSGAGESERLSRGQRTVPRAKQGCCFPRQLTSNPSLRSYPEHRSNGSCNTMEDAASADSLSSSS 332

Human   226 QA-----------------------------------------IKIETTSSKVESSSESYKIRV- 248
            :|                                         |:.||...|.|.:.::.:.:| 
 Frog   333 EAEDRPYEMKNICSAVIRLPMVSSVVGTPKGSRGSSDTLGRGDIEAETNGGKSEVTRKTSRAQVT 397

Human   249 --------AK---------------RERKAAKTLGVTVLAFVISWLPYTVDILIDAFMGFLTPAY 290
                    ||               :|:||||||...:|||:::|.||.:.:|:..|.....|..
 Frog   398 ALPSTIIRAKSEKNHHGKRKSNSLIKEKKAAKTLSAILLAFILTWTPYNIMVLVSTFCPDCVPKK 462

Human   291 IYEICCWSAYYNSAMNPLIYALFYPWFRKAIKLIL 325
            ::|:..|..|.||.:||:.|||....||:..|::|
 Frog   463 LWELGYWLCYVNSTVNPMCYALCNRSFRRTFKMLL 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TAAR8NP_444508.1 7tm_1 48..310 CDD:278431 85/426 (20%)
chrm1XP_004913717.1 7tmA_mAChR_M1 48..493 CDD:341356 94/453 (21%)
TM helix 1 49..75 CDD:341356 7/25 (28%)
TM helix 2 82..108 CDD:341356 9/25 (36%)
TM helix 3 120..150 CDD:341356 10/29 (34%)
TM helix 4 162..185 CDD:341356 4/22 (18%)
TM helix 5 207..236 CDD:341356 10/31 (32%)
TM helix 6 422..452 CDD:341356 14/29 (48%)
TM helix 7 461..486 CDD:341356 10/24 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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