DRSC/TRiP Functional Genomics Resources

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Protein Alignment DNAL1 and CG13708

DIOPT Version :10

Sequence 1:NP_113615.2 Gene:DNAL1 / 83544 HGNCID:23247 Length:190 Species:Homo sapiens
Sequence 2:NP_647933.1 Gene:CG13708 / 38582 FlyBaseID:FBgn0035577 Length:1301 Species:Drosophila melanogaster


Alignment Length:163 Identity:50/163 - (30%)
Similarity:81/163 - (49%) Gaps:20/163 - (12%)


- Green bases have known domain annotations that are detailed below.


Human    15 EEKTGQRPSEAKEIKLYAQIPPIEKMDASL-----SMLANCEKLSLSTNCIEKIANLNGLKNLRI 74
            ||:  :.||....|....|: .|:....||     |:......|.|..|.||:||||:||.:|.:
  Fly   435 EEE--ESPSVMTSISALEQL-SIKNKQLSLSASYGSIFQQLVFLDLYDNQIERIANLDGLPSLSV 496

Human    75 LSLGRNNIKNLNGLEAVGDTLEELWISYNFIEKL-KGIHIMKKLKILYMSNNLVK--DWAEFVKL 136
            |.||:|.|.::.||.::.|||..|.:..|.:..| ..|:.:::||.|.::.|.::  :..:|:.|
  Fly   497 LLLGKNRITDIGGLSSLKDTLRVLDLHGNKLTSLGSRINCLQQLKSLNLAGNQIRQINQQDFLGL 561

Human   137 AELPCLEDLVFVGNPLEE----KH--SAENNWI 163
            .   ||.:|....|.|..    :|  :.|..|:
  Fly   562 R---CLRELNLKRNKLRRINGFQHLVALERLWL 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DNAL1NP_113615.2 PPP1R42 37..181 CDD:455733 44/141 (31%)
LRR 1 49..70 10/20 (50%)
leucine-rich repeat 50..71 CDD:275378 11/20 (55%)
LRR 2 71..92 8/20 (40%)
leucine-rich repeat 72..90 CDD:275378 8/17 (47%)
LRR 3 94..115 6/21 (29%)
leucine-rich repeat 95..116 CDD:275382 5/21 (24%)
LRR 4 116..137 5/22 (23%)
leucine-rich repeat 117..140 CDD:275382 6/24 (25%)
leucine-rich repeat 142..172 CDD:275382 7/28 (25%)
CG13708NP_647933.1 leucine-rich repeat 449..471 CDD:275380 5/22 (23%)
PPP1R42 467..661 CDD:455733 41/128 (32%)
leucine-rich repeat 472..493 CDD:275380 11/20 (55%)
leucine-rich repeat 494..516 CDD:275380 8/21 (38%)
leucine-rich repeat 517..539 CDD:275380 5/21 (24%)
leucine-rich repeat 540..563 CDD:275380 6/25 (24%)
leucine-rich repeat 564..585 CDD:275380 5/20 (25%)
leucine-rich repeat 611..637 CDD:275380
Blue background indicates that the domain is not in the aligned region.

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