Protein Alignment RIN3 and Trc8

DIOPT Version :9

• Sequence 1: NP_001190515.1
• Gene: RIN3 / 835219
• AraportID: AT5G51450
• Length: 595
• Species: Arabidopsis thaliana
• Sequence 2: NP_996303.1
• Gene: Trc8 / 43476
• FlyBaseID: FBgn0039668
• Length: 809
• Species: Drosophila melanogaster
• Alignment Length: 622
• Identity: 128/622 - (20%)
• Similarity: 222/622 - (35%)
• Gaps: 179/622 - (28%)

plant    14 ALSFV---GLQVWTELSLDRLRADGII----TKNISLG-------NSENTLELLLSS-------- 56
            |::||   ||....|....||....::    |..:..|       .|:..|:|:.::
  Fly   290 AMNFVSNFGLSALIENEWQRLNVPNVLRVFWTIRLIQGGYALATTESDEPLDLMTATQKLLVDGC 354

plant    57 HTTIALLASFVLNIYILLVLSLKTLFFGD-------LYAIETRKL--VERLANYIIYKGTFLPFV 112
            .|..|:|.       :..|:|:...:.|.       .|..|.:.|  |..:..||:...|.|..:
  Fly   355 ETMTAVLG-------MTGVISMFCHYIGRGFQWYLLTYDDEEKSLGTVSAVLFYILALQTGLTSL 412

plant   113 VPRTVFQGVLWTIWLTVLCTLKMFQALARDRLDRLNASPSSTPWTYFRVYS--ALFMVLSTDL-- 173
            .|...|..:...:.|.:...|.....:....|..|:|:.:.:...:.|..|  |..:|||..|
  Fly   413 SPDKRFIRLCRNLCLLMTALLHFLHNIVSPILMSLSAARNPSRKRHVRALSVCAFLVVLSVSLLY 477

plant   174 -CWIKLSLMIYNTVGSSVYLLLLFE-PCGIAFETLQALLIHGFQLLDMWINHLAVKNSDCQRSKF 236
             .|.:.|:        |.:||.:.. ...:..:.|.:|..:...||            |.:|..|
  Fly   478 HLWSQQSI--------STWLLAVTAFSVEVVVKVLVSLATYTLFLL------------DARRQFF 522

plant   237 YDSM--------TAGSLLEW-KGLLNRNLGFFLDMA-----------------TLVMALGHYLHI 275
            ::.:        ..|:.:|: .|:|     .|::.|                 .::|.:..|.:|
  Fly   523 WEKLDDYLYYVRAFGNSVEFCFGIL-----LFINGAWILIFESAQNATGGGIRAIMMCIHAYFNI 582

plant   276 WWLHGMAFHLVDAVLFLNIRALLSSILKRIKGYIKLRVALGALHAALLDATSEELRDYDDECAIC 340
            |               ...||..|..:||.....|:        :||.:||..:|:.:||.||||
  Fly   583 W---------------CEARAGWSVFMKRRSAVHKI--------SALPEATPAQLQAFDDVCAIC 624

plant   341 REPMAKAKRLHCNHLFHLGCLRSWL---DQGLNEVYSCPTCRKPLFVGRTESEANPSRGEVSSDE 402
            .:.|..||...|.|.||..|||.||   |:       ||.|.: :.:...:::.|....|.:.
  Fly   625 YQEMYSAKITRCRHFFHGVCLRKWLYVQDR-------CPLCHE-IMMYTDKADENAPEAEPAP-- 679

plant   403 HLARQFERQNNSVHALTTGMFPTETPNFTES---DPWRLAFLNGISSSHLFLMPYRNSEVDPSWL 464
              |.|.|:...        ::|.:..|...:   .|.|              .|...||..|:
  Fly   680 --AAQAEQPMR--------IYPRDDANNAAAQRRSPER--------------APVEASEQAPA-- 718

plant   465 QTWSDQGVDVVGSSAGSRSVGLGQVQLMMRHLASVGEGSAQTTLDDASWGLWPMNPSQAS----- 524
                      ..||:.:.::|...|..::...|:|||..:..::..:|.....::.|.:|
  Fly   719 ----------TSSSSAAATIGAEAVSAIVESAAAVGEARSLVSVASSSSATHRISASGSSDSSYM 773

plant   525 TSSTYVPPGAGGRTGGLHLRTVSRAANNMASILAMAE 561
            |:|...||........:    .:.||:|...:..|::
  Fly   774 TASAQSPPPTATSAAAV----ATAAASNTTHMFRMSQ 806

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RIN3	NP_001190515.1	HRD1	57..>382	CDD:227568	83/368 (23%)
		RING	336..382	CDD:238093	20/48 (42%)
		CUE_RIN3_plant	556..593	CDD:270605	1/6 (17%)
Trc8	NP_996303.1	TRC8_N	122..590	CDD:290425	65/346 (19%)
		zf-rbx1	<618..659	CDD:289448	21/47 (45%)
		zf-RING_2	619..659	CDD:290367	20/46 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5243
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	73	1.000	Inparanoid score	I2439
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D897451at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.870