Protein Alignment RIN3 and Amfr

DIOPT Version :10

• Sequence 1: NP_001190515.1
• Gene: RIN3 / 835219
• AraportID: AT5G51450
• Length: 595
• Species: Arabidopsis thaliana
• Sequence 2: NP_001414073.1
• Gene: Amfr / 361367
• RGDID: 1311551
• Length: 643
• Species: Rattus norvegicus
• Alignment Length: 555
• Identity: 137/555 - (24%)
• Similarity: 223/555 - (40%)
• Gaps: 145/555 - (26%)

plant    51 ELLLSSHTTIALLASFVLNIYILLVLSLKTLFFGDLYAIETRKLVERLANYIIYKGTFLPFVV-P 114
            :.|||....:.:|.:....:.:|:...::.:.||.|...|.:.|.::..|:|.||..|:..|: .
  Rat    75 QYLLSDSLFVWVLVNTACCVLMLVAKLIQCIVFGPLRVSERQHLKDKFWNFIFYKFIFIFGVLNV 139

plant   115 RTVFQGVLWTIWLTVLCTLKMFQALARDRLDRLNASPSSTPWTYFRVYSALF-MVLSTDLCWIKL 178
            :||.:.|:|.:|...|..|.:...|.:||.:.|:.||::...::.||.|.|. |:||  .|.:.:
  Rat   140 QTVEEVVMWCLWFAGLVFLHLMVQLCKDRFEYLSFSPTTPMSSHGRVLSLLIAMLLS--CCGLAV 202

plant   179 SLMIYN-TVGSSVYLLLLFEPCGIAFETLQALLIHGFQLLDMWINHLAVKNSDCQRSKFYDSMTA 242
            ...:.. |.|......:..|...:...|...:|.:...|.|  :||
  Rat   203 VCCVTGYTHGMHTLAFMAAESLLVTVRTAHVILRYVIHLWD--LNH------------------- 246

plant   243 GSLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWLHGMAFHLVDAVLFLNIRALLSSILKRI-- 305
            ....|.||.......|.:::..|.:.|.|::|:.....:...:...|:|:.:|.|...:.:||
  Rat   247 EGTWEGKGTYVYYTDFVMELMLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRR 311

plant   306 -KGYIKLRVALGALHAALLDATSEELRDYDDECAICREPMAKAKRLHCNHLFHLGCLRSWLDQGL 369
             |.|:::   :|.:.|....||:|||...:|:||||.:.|..|::|.|.||||..||||||:|..
  Rat   312 HKNYLRV---VGNMEARFAVATAEELAVNNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDT 373

plant   370 NEVYSCPTCRKPLFVGRTESEANPSRGEVSSDEHL-----ARQFERQNNSVHALTTGMFPTETPN 429
                ||||||..|.:..........:|| :.||:|     |....|.|...|
  Rat   374 ----SCPTCRMSLNIADGSRAREDHQGE-NLDENLVPVAAAEGRPRLNQHNH------------- 420

plant   430 FTESDPWRLAFLNGISSSHLFLMPYRNSEVDPSWLQTWSDQGVDVVGSSAGSRSVGLGQVQLMMR 494
            |...|..|:|                      |||.::|                    |::|
  Rat   421 FFHFDGSRIA----------------------SWLPSFS--------------------VEVM-- 441

plant   495 HLASVGEGSAQTTLDDASWGLWPMNPSQASTSSTYVPPGAGGRTGGLHLRTVSRAANNMASILAM 559
            |..::                  :..:|||.|                            .:.||
  Rat   442 HTTNI------------------LGITQASNS----------------------------QLNAM 460

plant   560 AETVREVLPHVPDEIIFQDLQRTNSVSVTVNNLLQ 594
            |..::|:.|.||..::.||||.|.||.:|.:|:|:
  Rat   461 AHQIQEMFPQVPYHLVLQDLQMTRSVEITTDNILE 495

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RIN3	NP_001190515.1	HRD1	57..>382	CDD:227568	92/330 (28%)
		RING-H2_AMFR	335..382	CDD:438119	26/46 (57%)
		CUE_RIN3_plant	556..593	CDD:270605	16/36 (44%)
Amfr	NP_001414073.1	None