DRSC/TRiP Functional Genomics Resources

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Protein Alignment CASP2 and Strica

DIOPT Version :9

Sequence 1:NP_116764.2 Gene:CASP2 / 835 HGNCID:1503 Length:452 Species:Homo sapiens
Sequence 2:NP_001260718.1 Gene:Strica / 35528 FlyBaseID:FBgn0033051 Length:527 Species:Drosophila melanogaster


Alignment Length:219 Identity:49/219 - (22%)
Similarity:88/219 - (40%) Gaps:38/219 - (17%)


- Green bases have known domain annotations that are detailed below.


Human   209 HFTGEKELEFRSGGDVDHSTLVTLFKLLGYDVHVLCDQTAQEMQEKLQNFAQLPAHRVTDSCIVA 273
            |...:.:.|||.|...|...|...|:.|...|.|:.|.|...: :|.....|........:.::.
  Fly   320 HERFDNKNEFRKGSAQDVKVLRATFEQLKCKVEVITDATLVTI-KKTVRMLQTKDFEDKSALVLV 383

Human   274 LLSHGVEGAIYGVDGKLLQLQEVFQLFDNANCPSLQN-----KPKMFFIQACRGDETDRGVDQQD 333
            :||||..      ..::....:.:.|.|:...|.|:|     |||:.|:|||:|| ...|....|
  Fly   384 ILSHGTR------HDQIAAKDDDYSLDDDVVFPILRNRTLKDKPKLIFVQACKGD-CQLGGFMTD 441

Human   334 GKNHAGSPGCEESDAGKEKLPKMRLPTRSDMICGYACLKGTAAMRNTKRGSWYIEALAQVFSERA 398
            .....|||                    ::::..|:..:|..:.| |:.|:.:|:.|.:..:...
  Fly   442 AAQPNGSP--------------------NEILKCYSTYEGFVSFR-TEDGTPFIQTLCEALNRSG 485

Human   399 CDMHVADMLVKVNALI----KDRE 418
            ....:..:::.|..::    |||:
  Fly   486 KTSDIDTIMMNVRQVVKMQSKDRQ 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CASP2NP_116764.2 CARD_CASP2 32..118 CDD:260040
CASc 192..447 CDD:214521 49/219 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 327..354 5/26 (19%)
StricaNP_001260718.1 CASc 311..523 CDD:294037 49/219 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3573
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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