Protein Alignment AT5G46840 and eIF4B

DIOPT Version :10

• Sequence 1: NP_199496.1
• Gene: AT5G46840 / 834728
• AraportID: AT5G46840
• Length: 501
• Species: Arabidopsis thaliana
• Sequence 2: NP_001015319.1
• Gene: eIF4B / 3355041
• FlyBaseID: FBgn0020660
• Length: 459
• Species: Drosophila melanogaster
• Alignment Length: 295
• Identity: 57/295 - (19%)
• Similarity: 108/295 - (36%)
• Gaps: 82/295 - (27%)

plant   266 PRKKQKGHDDTHLYDPKRTVFMGNLPFDVKDEEVYQLFTGKSNLENSIEAVRVIRDPHLN-IGKG 329
            ||..:...|::..:......::.|||||..::::|:.|.|     .::.::|:.|:...| ..:|
  Fly    63 PRANRIFDDNSIPHKAPFIAYINNLPFDANEDDLYEFFEG-----INLISLRLPREDGENGRSRG 122

plant   330 IAYVLFKTREAANLVLKKGYLKLRERELRIS-RVKPDTPSKRKSNP------------------- 374
            ..||..:.||....||......::.|.:||. ..:.|..|::|||.
  Fly   123 FGYVELENREDLIHVLSLPDPSIKGRRIRIELSNENDQQSRQKSNRRFDGFGNNGDNRDSGNWRR 187

plant   375 ---------------SEAYSPAQKRL-QKDKVVTP--------------TPTGK----ANLSYQG 405
                           ..:::..:|.| .:|.|.||              :||.:    .:..|:.
  Fly   188 DSQNNGSNFGYSSNFERSFNRERKSLPDRDDVNTPGSWRTSARPQSIDTSPTRREVEQVSEKYRE 252

plant   406 VR---ASKSGDDKKTPYQKSSAQTKMRPRG----------------SSSNDNKKSGNNSASKERS 451
            .|   |.:...::.:..::...:..::||.                ...|.:|:.|.:|.:...|
  Fly   253 GRVKIADRYSREETSKVEEERPKLNLKPRTLPLPDVKTIEFEKCDVDEFNLDKQGGTSSLNVFGS 317

plant   452 QKRPAVAARKAKAN---AKGSKESGGKRFAGTKRK 483
            .|....|||:.:..   |...|:..|:|..|...|
  Fly   318 AKPVDTAARELEIEQRLALARKQDKGRREQGLNEK 352

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
AT5G46840	NP_199496.1	RRM1_RBM34	171..261	CDD:409828
		RRM2_RBM34	284..360	CDD:409829	20/76 (26%)
eIF4B	NP_001015319.1	RRM_eIF4B	78..159	CDD:409836	21/85 (25%)