DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GFI1B and sens

DIOPT Version :10

Sequence 1:NP_001358837.1 Gene:GFI1B / 8328 HGNCID:4238 Length:352 Species:Homo sapiens
Sequence 2:NP_524818.1 Gene:sens / 45328 FlyBaseID:FBgn0002573 Length:541 Species:Drosophila melanogaster


Alignment Length:145 Identity:100/145 - (68%)
Similarity:112/145 - (77%) Gaps:7/145 - (4%)


- Green bases have known domain annotations that are detailed below.


Human   212 HVHSQGIPAGSSPEPAPDPPGPHFLRQE-------RSFECRMCGKAFKRSSTLSTHLLIHSDTRP 269
            |.|.|..|..::.:.|.........:.|       |:|:|:.|||:|||||||||||||||||||
  Fly   376 HQHQQQHPDSTATDVARRSSSSSSYQGENEEKRSGRNFQCKQCGKSFKRSSTLSTHLLIHSDTRP 440

Human   270 YPCQFCGKRFHQKSDMKKHTYIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFSCELCTKG 334
            ||||:||||||||||||||||||||||||||.||.||||||||||||.|||||:|||.|.||.:.
  Fly   441 YPCQYCGKRFHQKSDMKKHTYIHTGEKPHKCTVCLKAFSQSSNLITHMRKHTGYKPFGCHLCDQS 505

Human   335 FQRKVDLRRHRESQH 349
            |||||||||||||:|
  Fly   506 FQRKVDLRRHRESRH 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GFI1BNP_001358837.1 C2H2 Zn finger 165..186 CDD:275368
C2H2 Zn finger 194..214 CDD:275368 1/1 (100%)
C2H2 Zn finger 244..264 CDD:275368 16/19 (84%)
COG5048 252..>329 CDD:227381 70/76 (92%)
C2H2 Zn finger 272..292 CDD:275368 18/19 (95%)
zf-H2C2_2 284..309 CDD:463886 22/24 (92%)
C2H2 Zn finger 300..320 CDD:275368 16/19 (84%)
C2H2 Zn finger 328..345 CDD:275368 12/16 (75%)
sensNP_524818.1 zf-C2H2 413..435 CDD:395048 17/21 (81%)
C2H2 Zn finger 415..435 CDD:275368 16/19 (84%)
zf-C2H2 441..463 CDD:395048 20/21 (95%)
C2H2 Zn finger 443..463 CDD:275368 18/19 (95%)
zf-H2C2_2 455..480 CDD:463886 22/24 (92%)
C2H2 Zn finger 471..491 CDD:275368 16/19 (84%)
zf-H2C2_2 483..506 CDD:463886 16/22 (73%)
C2H2 Zn finger 499..516 CDD:275368 12/16 (75%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.