DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FZD9 and Corin

DIOPT Version :9

Sequence 1:NP_003499.1 Gene:FZD9 / 8326 HGNCID:4047 Length:591 Species:Homo sapiens
Sequence 2:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster


Alignment Length:304 Identity:70/304 - (23%)
Similarity:103/304 - (33%) Gaps:97/304 - (31%)


- Green bases have known domain annotations that are detailed below.


Human    33 GRGAAP--CQAVEIPMCRG--IGYNLTRMPNLLGHTSQGEAAAELAEFAPLVQYGCHSHLRFFLC 93
            |:..||  |..:.:..|:|  |.||.|..||.:||..|.|...:|..:..||...|:..:..|||
  Fly   771 GKNPAPGTCLPIIVRFCQGPQIPYNYTVFPNYIGHFGQLETQTDLDSYEALVDVRCYELVSLFLC 835

Human    94 SLYAPMCTDQVSTPIPACRPMCEQARLRCAPIMEQFNFGWPDSLDCAR----------------- 141
            :|:.|.| .|....:|.|:.:|.:...||....:.|....|:.|:|..                 
  Fly   836 TLFVPKC-GQSGATVPPCKTLCTETMRRCGFFFDVFGLSLPEYLNCKLFKDFPSSEDCVGLDEVR 899

Human   142 ---------------------LPTRN--DPHALCMEAPENA---TAGPAEPHKGLGMLPVAPRPA 180
                                 ||...  |.|..||:..:.|   ..||.|.:.|....       
  Fly   900 EVMRAATHPKCDGFQCDQNRCLPQEYVCDGHLDCMDQADEAKCERCGPDEIYCGDSQC------- 957

Human   181 RPPGDLGPGAGGSGTCENPEKFQYVEKSRSC---APR---CGPGV-EVF--------------WS 224
                     .|....|:......|.:..|:|   :.|   .|.|| ||:              |.
  Fly   958 ---------IGTKHICDGIIDCPYGQDERNCLRLSERNGDVGTGVLEVYRIGQRQWMPACVKNWD 1013

Human   225 RRDKDFALVWMAVWSALCFFSTAFTVLTFLLEPHRFQYPERPII 268
            |.....|:..:..:||:    .|.:|||        |...||::
  Fly  1014 RAVSPSAVCSILGYSAV----NATSVLT--------QLTHRPLL 1045

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FZD9NP_003499.1 TM helix 1 230..255 CDD:320164 7/24 (29%)
TM helix 2 264..285 CDD:320164 2/5 (40%)
TM helix 3 314..340 CDD:320164
TM helix 4 357..373 CDD:320164
TM helix 5 395..425 CDD:320164
TM helix 6 444..471 CDD:320164
TM helix 7 503..528 CDD:320164
Lys-Thr-X-X-X-Trp motif, mediates interaction with the PDZ domain of Dvl family members. /evidence=ECO:0000250 532..537
Required for CTNNB1 accumulation and TCF transcription factor activity. /evidence=ECO:0000250|UniProtKB:Q8K4C8 554..591
CRD_FZ 35..161 CDD:321937 42/172 (24%)
Required for Wnt-activated receptor activity. /evidence=ECO:0000250|UniProtKB:Q8K4C8 58..172 37/156 (24%)
7tmF_FZD9 221..542 CDD:320164 13/62 (21%)
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 33/116 (28%)
LDLa 911..942 CDD:238060 7/30 (23%)
LDLa 945..979 CDD:238060 8/49 (16%)
SR 980..>1034 CDD:214555 12/57 (21%)
SRCR 992..1086 CDD:278931 16/66 (24%)
Tryp_SPc 1103..1343 CDD:214473
Tryp_SPc 1104..1346 CDD:238113
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.