DRSC/TRiP Functional Genomics Resources

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Protein Alignment FZD4 and Fzd4

DIOPT Version :9

Sequence 1:NP_036325.2 Gene:FZD4 / 8322 HGNCID:4042 Length:537 Species:Homo sapiens
Sequence 2:NP_072145.1 Gene:Fzd4 / 64558 RGDID:71017 Length:538 Species:Rattus norvegicus


Alignment Length:538 Identity:523/538 - (97%)
Similarity:528/538 - (98%) Gaps:1/538 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAWRGAGPSVPGAPGGVGLSLG-LLLQLLLLLGPARGFGDEEERRCDPIRISMCQNLGYNVTKMP 64
            |||:|.||||.|.||||.|.|| ||||||||..||.|||||||||||||||:|||||||||||||
  Rat     1 MAWQGTGPSVRGMPGGVRLRLGLLLLQLLLLQRPALGFGDEEERRCDPIRIAMCQNLGYNVTKMP 65

Human    65 NLVGHELQTDAELQLTTFTPLIQYGCSSQLQFFLCSVYVPMCTEKINIPIGPCGGMCLSVKRRCE 129
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat    66 NLVGHELQTDAELQLTTFTPLIQYGCSSQLQFFLCSVYVPMCTEKINIPIGPCGGMCLSVKRRCE 130

Human   130 PVLKEFGFAWPESLNCSKFPPQNDHNHMCMEGPGDEEVPLPHKTPIQPGEECHSVGTNSDQYIWV 194
            |||||||||||:|||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   131 PVLKEFGFAWPDSLNCSKFPPQNDHNHMCMEGPGDEEVPLPHKTPIQPGEECHSVGTNSDQYIWV 195

Human   195 KRSLNCVLKCGYDAGLYSRSAKEFTDIWMAVWASLCFISTAFTVLTFLIDSSRFSYPERPIIFLS 259
            ||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
  Rat   196 KRSLNCVLKCGYDAGLYSRSAKEFTDIWMAVWASLCFISTTFTVLTFLIDSSRFSYPERPIIFLS 260

Human   260 MCYNIYSIAYIVRLTVGRERISCDFEEAAEPVLIQEGLKNTGCAIIFLLMYFFGMASSIWWVILT 324
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   261 MCYNIYSIAYIVRLTVGRERISCDFEEAAEPVLIQEGLKNTGCAIIFLLMYFFGMASSIWWVILT 325

Human   325 LTWFLAAGLKWGHEAIEMHSSYFHIAAWAIPAVKTIVILIMRLVDADELTGLCYVGNQNLDALTG 389
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||:||||||
  Rat   326 LTWFLAAGLKWGHEAIEMHSSYFHIAAWAIPAVKTIVILIMRLVDADELTGLCYVGNQSLDALTG 390

Human   390 FVVAPLFTYLVIGTLFIAAGLVALFKIRSNLQKDGTKTDKLERLMVKIGVFSVLYTVPATCVIAC 454
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   391 FVVAPLFTYLVIGTLFIAAGLVALFKIRSNLQKDGTKTDKLERLMVKIGVFSVLYTVPATCVIAC 455

Human   455 YFYEISNWALFRYSADDSNMAVEMLKIFMSLLVGITSGMWIWSAKTLHTWQKCSNRLVNSGKVKR 519
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   456 YFYEISNWALFRYSADDSNMAVEMLKIFMSLLVGITSGMWIWSAKTLHTWQKCSNRLVNSGKVKR 520

Human   520 EKRGNGWVKPGKGSETVV 537
            |||||||||||||:||||
  Rat   521 EKRGNGWVKPGKGNETVV 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FZD4NP_036325.2 CRD_FZ4 42..167 CDD:143557 122/124 (98%)
7tmF_FZD4 209..509 CDD:320166 297/299 (99%)
TM helix 1 218..243 CDD:320166 23/24 (96%)
TM helix 2 252..273 CDD:320166 20/20 (100%)
TM helix 3 303..329 CDD:320166 25/25 (100%)
TM helix 4 346..362 CDD:320166 15/15 (100%)
TM helix 5 384..413 CDD:320166 28/28 (100%)
TM helix 6 433..460 CDD:320166 26/26 (100%)
TM helix 7 470..495 CDD:320166 24/24 (100%)
Lys-Thr-X-X-X-Trp motif, mediates interaction with the PDZ domain of Dvl family members. /evidence=ECO:0000250 499..504 4/4 (100%)
PDZ-binding 535..537 1/1 (100%)
Fzd4NP_072145.1 CRD_FZ4 43..168 CDD:143557 122/124 (98%)
Frizzled 211..510 CDD:279827 296/298 (99%)
Lys-Thr-X-X-X-Trp motif, mediates interaction with the PDZ domain of Dvl family members. /evidence=ECO:0000250 500..505 4/4 (100%)
PDZ-binding 536..538 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83696958
Domainoid 1 1.000 605 1.000 Domainoid score I4757
eggNOG 1 0.900 - - E1_KOG3577
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7325
Inparanoid 1 1.050 1079 1.000 Inparanoid score I4853
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG50792
OrthoDB 1 1.010 - - D106057at32523
OrthoFinder 1 1.000 - - FOG0012161
OrthoInspector 1 1.000 - - oto137155
orthoMCL 1 0.900 - - OOG6_109675
Panther 1 1.100 - - LDO PTHR11309
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X10059
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1818.270

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