DRSC/TRiP Functional Genomics Resources

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Protein Alignment FZD4 and cfz-2

DIOPT Version :9

Sequence 1:NP_036325.2 Gene:FZD4 / 8322 HGNCID:4042 Length:537 Species:Homo sapiens
Sequence 2:NP_503965.2 Gene:cfz-2 / 178768 WormBaseID:WBGene00000478 Length:578 Species:Caenorhabditis elegans


Alignment Length:539 Identity:191/539 - (35%)
Similarity:291/539 - (53%) Gaps:78/539 - (14%)


- Green bases have known domain annotations that are detailed below.


Human    27 LLLLLGPARG-FGDEEERRCDPIRISMCQNLGYNVTKMPNLVGHELQTDAELQLTTFTPLIQYGC 90
            |.||||.... ||  :.::|:.|.|.:|:.:|||:|..||..|||.|.:|.|::..|.||::.||
 Worm     8 LFLLLGSCGALFG--KRQKCEQITIPLCKGIGYNMTSFPNSYGHEKQEEAGLEVHQFYPLVEVGC 70

Human    91 SSQLQFFLCSVYVPMCTEKINIPIGPCGGMCLSVKRRCEPVLKEFGFAWPESLNCSKFPPQND-- 153
            ...|:||||::|.|:|.|..:.||.||..:|:..:.:|.|::.::||.|||:|:|...|..:|  
 Worm    71 FQHLKFFLCTMYTPICQENYDKPILPCMELCVEARSKCSPIMAKYGFRWPETLSCEALPKMSDQM 135

Human   154 -------------------HNH------------MCMEGPG------DEEVPLPHKTPIQPGEEC 181
                               |:|            ...:||.      |.||       |....||
 Worm   136 STGNICAAPPDTPKKQHKGHHHKNQNQNQNQNHNYSPDGPEVGISKIDNEV-------IAGPSEC 193

Human   182 HSVGTNSDQYIWVKRS-----LNCVLKCGYDAGLYSRSAKEFTDIWMAVWASLCFISTAFTVLTF 241
            ........|::..::|     .||...|...|...|.|   ....|||.|:..|.:..:||.|||
 Worm   194 QCTCNQPFQFVASEKSKVGNVTNCAYSCHSPALAESHS---LVSNWMAFWSITCCVLASFTFLTF 255

Human   242 LIDSSRFSYPERPIIFLSMCYNIYSIAYIVRLTVGRERISCDFEEAAEPVLIQEGLKNTG--CAI 304
            ||::.||.||||||..|:.|..:.::.:::|..||.|.|:||      .:.|:....|:|  |.:
 Worm   256 LIETDRFQYPERPIFMLAFCQLMVAVGFMIRYFVGHEEIACD------SMRIKGADDNSGSLCFV 314

Human   305 IFLLMYFFGMASSIWWVILTLTWFLAAGLKWGHEAIEMHSSYFHIAAWAIPAVKTIVILIMRLVD 369
            :|||.||||||:|:|||||:|||.|:|..||..|||...|.:||:..|.:||::|:::::...:|
 Worm   315 VFLLTYFFGMAASVWWVILSLTWVLSAASKWSPEAISSFSFHFHVVGWCLPAIQTVLVIVFNAID 379

Human   370 ADELTGLCYVGNQNLDALTGFVVAPLFTYLVIGTLFIAAGLVALFKIRSNLQKDGTKTD---KLE 431
            .|.:||:|||||.:|.....||:.||..|.::|.||:..|...|:.||:.:||.....:   |:.
 Worm   380 GDPITGICYVGNTDLQFQRIFVLFPLLVYFIVGVLFLVIGFCNLWSIRNEVQKQHPSLESAHKIT 444

Human   432 RLMVKIGVFSVLYTVPATCVIACYFYEISNWALFRYS----------ADDSNMAVEMLKIFMSLL 486
            :||.|||:||:|||:|:..:|...|||.::.:|:..|          ..||::.:.::|.....:
 Worm   445 QLMSKIGIFSLLYTIPSLLIICVLFYEQNHRSLWEQSQLCSCSPKQTIGDSSLIISLIKTCCMCI 509

Human   487 VGITSGMWIWSAKTLHTWQ 505
            :|.|||.|:.|.|||.:|:
 Worm   510 LGWTSGFWVCSTKTLSSWK 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FZD4NP_036325.2 CRD_FZ4 42..167 CDD:143557 51/163 (31%)
7tmF_FZD4 209..509 CDD:320166 122/312 (39%)
TM helix 1 218..243 CDD:320166 10/24 (42%)
TM helix 2 252..273 CDD:320166 6/20 (30%)
TM helix 3 303..329 CDD:320166 18/25 (72%)
TM helix 4 346..362 CDD:320166 6/15 (40%)
TM helix 5 384..413 CDD:320166 10/28 (36%)
TM helix 6 433..460 CDD:320166 15/26 (58%)
TM helix 7 470..495 CDD:320166 7/24 (29%)
Lys-Thr-X-X-X-Trp motif, mediates interaction with the PDZ domain of Dvl family members. /evidence=ECO:0000250 499..504 3/4 (75%)
PDZ-binding 535..537
cfz-2NP_503965.2 CRD_FZ5_like 24..146 CDD:143565 46/121 (38%)
Frizzled 230..532 CDD:279827 121/308 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D237456at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14824
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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