DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AT5G18840 and CG33282

DIOPT Version :9

Sequence 1:NP_568367.1 Gene:AT5G18840 / 832002 AraportID:AT5G18840 Length:482 Species:Arabidopsis thaliana
Sequence 2:NP_001097067.1 Gene:CG33282 / 2768939 FlyBaseID:FBgn0053282 Length:460 Species:Drosophila melanogaster


Alignment Length:452 Identity:115/452 - (25%)
Similarity:209/452 - (46%) Gaps:33/452 - (7%)


- Green bases have known domain annotations that are detailed below.


plant    45 LFSTFVAVCGSFEFGSCVGYSAPTQSSIRQ-----DLNLSLAEFSMFGSILTIGAMLGAVMSGKI 104
            |.:|.:....:|..|..||:.:||.:.|:.     |..::||:.|..||:|.:.::.|.:....:
  Fly    18 LLATVIVNIITFGHGVGVGWLSPTLTKIQTADSPLDFEVNLAQISWLGSMLGLDSLCGNLTIAML 82

plant   105 SDFSGRKGAMRTSA--CFCITGWLAVFFTKGALLLDVGRFFTGYGIGVFSYVVPVYIAEISPKNL 167
            .:.:|||..:...|  ..||  |:.::.......|...||..|:..|....|||::|:|::..|:
  Fly    83 IERAGRKFCLYLMAGPYACI--WILIYCASNVYYLYAARFLCGFTGGAGYLVVPIFISEVADSNI 145

plant   168 RGGLTTLNQLMIVIGSSVSFLIGSLISWKTLALTGLAPCIVLLFGLCFIPESPRWLAK----AGH 228
            ||.||::..|.:.:|....:::.:.:::..:....:...:........:||:..:|.|    |..
  Fly   146 RGALTSMVMLSVDLGILAGYILSTYLAYHVVPFLAIILPVAYFIANIMLPETAPYLLKKSQLAAA 210

plant   229 EKEFRVALQKLRGKDADITNEADGIQ--------VSIQALEILPKARIQDLVSKKYGRSVIIGVS 285
            |..||.    .|.:.:.|..:...:.        :|.|.....|.: .:||.:|...:.....:.
  Fly   211 ENSFRY----YRNQRSAICEQTSKVNFEELRTAVLSQQTRNATPLS-YKDLTTKPALKGFAASIV 270

plant   286 LMVFQQFVGINGIGFYASETFVKAG-FTSGKLGTIAIACVQVPITVLGTILIDKSGRRPLIMISA 349
            |.:..||.|:.....|.|:.|..:| .......||.|..||:......|||:|..|||.|::||.
  Fly   271 LSLGYQFSGVFSFINYMSDIFKASGSVVDVNTATIIIGLVQIVGVYTSTILVDIVGRRVLMLIST 335

plant   350 GGIFLGCILTGT-SFLLKGQSLL-LEWVPSLAVGGVLIYVAAFSIGMGPVPWVIMSEIFPINVKG 412
            .|:.:|||..|. ::|.|...|. ..|:| |.:..::.|||  :||:..:.::::.|:||:.::.
  Fly   336 MGVGIGCIAFGCFTYLAKIYDLSDFNWLP-LVLMIIICYVA--NIGLIGIFFLVLVELFPVKIRS 397

plant   413 IAGSLVVLVNWSGAWAVSYTFNFLMS-WSSPGTFYLYSAFAAATIIFVAKMVPETKGKTLEE 473
            :|.||.|:......:.....|..::. |....|.:..:|.|..|..:....:.|||||::.|
  Fly   398 LATSLSVIFLSLLVFGTLKLFPLMLHYWGISFTMWFSAASALLTFFYFWLFLQETKGKSMIE 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AT5G18840NP_568367.1 MFS_GLUT6_8_Class3_like 45..473 CDD:340916 114/450 (25%)
CG33282NP_001097067.1 MFS 21..448 CDD:119392 108/436 (25%)
MFS_1 53..409 CDD:284993 94/365 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53651
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.020

Return to query results.
Submit another query.