Sequence 1: | NP_197131.2 | Gene: | SYN4 / 831487 | AraportID: | AT5G16270 | Length: | 1031 | Species: | Arabidopsis thaliana |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001015132.1 | Gene: | vtd / 3354896 | FlyBaseID: | FBgn0260987 | Length: | 715 | Species: | Drosophila melanogaster |
Alignment Length: | 1062 | Identity: | 223/1062 - (20%) |
---|---|---|---|
Similarity: | 359/1062 - (33%) | Gaps: | 392/1062 - (36%) |
- Green bases have known domain annotations that are detailed below.
plant 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEAPIALRLSSHLLLGVVR 65
plant 66 IYSRKVNYLFDDCSEALLKVKQAFRSAAVDLPPEESTAPYHSITLPETFDLDDFELPD-NEIFQG 129
plant 130 NYVDHHVSTKEQITLQDTMDGVVYSTSQFGL-DERFGD----GDTSQ-----AALDLDEAVFQDK 184
plant 185 DVIGSDDEGVPGIDHNAYLDAAA--PGIKDSMEGVSEAMPMDFNEEQVEDLAMNNEFIEDAQAPQ 247
plant 248 TPGLVEVPNSSSVREQMACDDHMDVEDLNAEEGIKSSGELNANEMPKRGEDLSSEYNAPESAVTP 312
plant 313 VEVDKSQIDENVNTQNEPEEERAEHVH-VTSPCCSHITTEMEDPGQVMNEAGANVVPDKPDAVPP 376
plant 377 LETPGEENRDHFAIATEVNQETDSSLQGDEQAYSRPDGQLNNAHETDEQLGNLTGFTD-SDFPPP 440
plant 441 EKVLAVPNRQGDGNDFMVESTPDKEDPGTCNDDAGNNNITGKKRTFTESTLTAESLNSVESVGLI 505
plant 506 QSKRTADSVPDDDDLLSSILVGKSSFLKMRPTPVLEPATTKRLRSAPRSTATKRKVLMDDPMVLH 570
plant 571 GDIIRQQLTNTEDIRRVRKKAPCTVPEIVMLQRQALEDGLFKEP--------IFTGMSVELVSLH 627
plant 628 TEPYDLRGIMIIENDDRHASVGAVE----DNECSVTAVEENKTEESSDPQAHPNDCEEQPGTAHT 688
plant 689 HPQEEQTINQQEELKDDNELAEKSDLE---VLKEGNGAADEVNLVVID-----DVSQIPSEEKLD 745
plant 746 RVEDLQVEESHENHDGEGGQDVCADPNEKSCTDVIEIAEGDTDINPIFNEMDLKVEDELPHEDEK 810
plant 811 TDASAEVSELGRDDQTPCDNTVGSTETGCLEAGDLSNMALENCNEPLVEANSDGLNPETESYNKY 875
plant 876 EPHNEMSNEEASMQNALDG-EHTSRDGLMGDNDEMDTMENAHDTGFLNVDDDEVDEDHEEDDIQY 939
plant 940 DDETRLLENSGWSSRTRAVAKYLQTLFDKETEN--GKNVLVADKLLAGKTRKEASRMFFETLVLK 1002
plant 1003 TRDYIQVEQGKPYESIIIKPRP 1024 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SYN4 | NP_197131.2 | Rad21_Rec8_N | 1..104 | CDD:282655 | 58/102 (57%) |
Rad21_Rec8 | 972..1026 | CDD:282654 | 18/55 (33%) | ||
vtd | NP_001015132.1 | Rad21_Rec8_N | 1..106 | CDD:282655 | 59/104 (57%) |
Rad21_Rec8 | 657..710 | CDD:282654 | 18/52 (35%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 119 | 1.000 | Domainoid score | I1912 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1213 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 178 | 1.000 | Inparanoid score | I1470 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001363 | |
OrthoInspector | 1 | 1.000 | - | - | otm2907 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103388 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR12585 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1093 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
10 | 9.910 |