Protein Alignment ATL43 and HRD1

DIOPT Version :9

• Sequence 1: NP_196200.3
• Gene: ATL43 / 830466
• AraportID: AT5G05810
• Length: 407
• Species: Arabidopsis thaliana
• Sequence 2: NP_014630.1
• Gene: HRD1 / 854149
• SGDID: S000005373
• Length: 551
• Species: Saccharomyces cerevisiae
• Alignment Length: 232
• Identity: 45/232 - (19%)
• Similarity: 82/232 - (35%)
• Gaps: 70/232 - (30%)

plant   116 RKNSGIDRSV----IESLPVFRFGALSGHKDGLECAVCLARF--EPTEVL--------RLLPKCK 166
            |.|..:|.::    :|.|      ..|.:.|.: |.:|:...  .|.:..        :.|| |.
Yeast   322 RNNKQLDDTLVTVTVEQL------QNSANDDNI-CIICMDELIHSPNQQTWKNKNKKPKRLP-CG 378

plant   167 HAFHVECVDTWLDAHSTCPLCRYRVDPED---ILLIGDCNSWFELQFSKDESNSVNNNPPGLT-- 226
            |..|:.|:..|::...|||:||..|..|.   :......||....|.:..:|..:..:..|..
Yeast   379 HILHLSCLKNWMERSQTCPICRLPVFDEKGNVVQTTFTSNSDITTQTTVTDSTGIATDQQGFANE 443

plant   227 -------------RFIPVSRI------------------------SGRHSSAGERASRLNEIRTS 254
                         |.:|...|                        :| .:|.|...|....:.|:
Yeast   444 VDLLPTRTTSPDIRIVPTQNIDTLAMRTRSTSTPSPTWYTFPLHKTG-DNSVGSSRSAYEFLITN 507

plant   255 SSYKSNPMSFRRSLDSSLKVN----DAGEEKSESVAV 287
            |..|.|.:..:.::::. :||    |.||:.::.:.:
Yeast   508 SDEKENGIPVKLTIENH-EVNSLHGDGGEQIAKKIVI 543

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ATL43	NP_196200.3	RING-H2_EL5_like	145..188	CDD:319375	13/52 (25%)
HRD1	NP_014630.1	HRD1	5..551	CDD:227568	45/232 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910