Protein Alignment ATL43 and Rnf38

DIOPT Version :9

• Sequence 1: NP_196200.3
• Gene: ATL43 / 830466
• AraportID: AT5G05810
• Length: 407
• Species: Arabidopsis thaliana
• Sequence 2: XP_011248417.2
• Gene: Rnf38 / 73469
• MGIID: 1920719
• Length: 623
• Species: Mus musculus
• Alignment Length: 166
• Identity: 52/166 - (31%)
• Similarity: 75/166 - (45%)
• Gaps: 34/166 - (20%)

plant    36 PPPLP-------------PPSPPPRHNFTSSLMPGIAVVIAVLTAFFSLTFLLLLYVKHCKRRNG 87
            ||.:|             |..|||.|   .||:|.:..::.|..| ...||...|.|:..:..|.
Mouse   468 PPFMPRRLTGRSRYRSQQPMPPPPYH---PSLLPYVLSMLPVPPA-VGPTFSFELDVEDGEVENY 528

plant    88 SVYVNHPQRFAITRYGGGYYNGGGVVGGRKNSGIDRSVIESLPVFRFGALSGHKDGLECAVCLAR 152
            ...:|..:|                :|..|..|:.::.||.||.:||...:...:...|.||:..
Mouse   529 EALLNLAER----------------LGEAKPRGLTKADIEQLPSYRFNPSNHQSEQTLCVVCMCD 577

plant   153 FEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCR 188
            ||..::||:|| |.|.||.:|||.||..:.|||:||
Mouse   578 FESRQLLRVLP-CNHEFHAKCVDKWLKGNRTCPICR 612

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ATL43	NP_196200.3	RING-H2_EL5_like	145..188	CDD:319375	21/42 (50%)
Rnf38	XP_011248417.2	RING-H2_RNF38_like	568..612	CDD:319386	21/44 (48%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X146
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.910