DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment ATL43 and Rnf130

DIOPT Version :9

Sequence 1:	NP_196200.3	Gene:	ATL43 / 830466	AraportID:	AT5G05810	Length:	407	Species:	Arabidopsis thaliana
Sequence 2:	XP_038942740.1	Gene:	Rnf130 / 652955	RGDID:	1562041	Length:	439	Species:	Rattus norvegicus

Alignment Length:	219	Identity:	54/219 - (24%)
Similarity:	87/219 - (39%)	Gaps:	53/219 - (24%)

- Green bases have known domain annotations that are detailed below.

plant    45 PPRHNFTSSLMPGIAVVIAVLTAFFSLTFLLLLYVKHCKRRNGSVYVNHPQRFAITRYGGGYYNG 109
            ||: ||:...:..:::...|| ...|..:|:..:::..:      |.|...|
  Rat   186 PPK-NFSRGSLVFVSISFIVL-MIISSAWLIFYFIQKIR------YTNARDR------------- 229

plant   110 GGVVGGRKNSGIDRSVIESLP--VFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVE 172
                ..|:.....:..|..|.  ..:.|......|...||||:..::..:|:|:|| |||.||..
  Rat   230 ----NQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLP-CKHVFHKS 289

plant   173 CVDTWLDAHSTCPLCRYRVDPEDILLIG-----DC--NSWFELQFSKDESNSVNNNPPGLTRFIP 230
            |||.||..|.|||:|:..:    :..:|     .|  |..|:::              .|||...
  Rat   290 CVDPWLSEHCTCPMCKLNI----LKALGIVPNLPCTDNVAFDME--------------RLTRTQA 336

plant   231 VSRISGRHSSAGERASRLNEIRTS 254
            |:|.|.....|.:.:..|..:|||
  Rat   337 VNRRSALGDLANDSSLGLEPLRTS 360

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
ATL43	NP_196200.3	RING-H2_EL5_like	145..188	CDD:319375	22/42 (52%)
Rnf130	XP_038942740.1	PA_GRAIL_like	40..179	CDD:239037
		HRD1	<197..366	CDD:227568	50/207 (24%)
		RING-H2_RNF130	262..310	CDD:319717	23/52 (44%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	66	1.000	Domainoid score	I4247
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.910