Protein Alignment ATL43 and rnf38

DIOPT Version :9

• Sequence 1: NP_196200.3
• Gene: ATL43 / 830466
• AraportID: AT5G05810
• Length: 407
• Species: Arabidopsis thaliana
• Sequence 2: XP_021331935.1
• Gene: rnf38 / 566820
• ZFINID: ZDB-GENE-030131-8693
• Length: 676
• Species: Danio rerio
• Alignment Length: 217
• Identity: 61/217 - (28%)
• Similarity: 84/217 - (38%)
• Gaps: 68/217 - (31%)

plant    19 VSLADNHTAV----VITTSDTPPPLPPPS------------------------------------ 43
            |.|..:|.:|    ....|..|.||||.:
Zfish   470 VELLGDHLSVGGGFNYPHSGHPSPLPPSTPLQFLSHEPLHQELFGMPYPHFMPRRITGRRYRSQQ 534

plant    44 ---PPPRHNFTSSLMPGIAVVIAVL----TAFFSLTFLLLLYVKHCKRRNGSVYVNHPQRFAITR 101
               |||.|   .||:|...:|.:||    || ......|.|.|...:..|....:|..:|
Zfish   535 AVPPPPYH---PSLLPYFLLVRSVLPVQPTA-VGPAISLELDVDDGEVENYEALLNLAER----- 590

plant   102 YGGGYYNGGGVVGGRKNSGIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCK 166
                       :|..|..|:.::.||.||.:||...:...:...|.||:..||..::||:|| |.
Zfish   591 -----------LGEAKPRGLTKADIEQLPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLP-CN 643

plant   167 HAFHVECVDTWLDAHSTCPLCR 188
            |.||.:|||.||.|:.|||:||
Zfish   644 HEFHAKCVDKWLKANRTCPICR 665

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ATL43	NP_196200.3	RING-H2_EL5_like	145..188	CDD:319375	22/42 (52%)
rnf38	XP_021331935.1	RING-H2_RNF38_like	621..665	CDD:319386	22/44 (50%)
		RING-H2 finger (C3H2C3-type)	624..664	CDD:319386	22/40 (55%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X146
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.910