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Protein Alignment ATL43 and RNF181
DIOPT Version :9
| Sequence 1: | NP_196200.3 |
Gene: | ATL43 / 830466 |
AraportID: | AT5G05810 |
Length: | 407 |
Species: | Arabidopsis thaliana |
| Sequence 2: | XP_005264416.1 |
Gene: | RNF181 / 51255 |
HGNCID: | 28037 |
Length: | 187 |
Species: | Homo sapiens |
| Alignment Length: | 71 |
Identity: | 19/71 - (26%) |
| Similarity: | 28/71 - (39%) |
Gaps: | 6/71 - (8%) |
- Green bases have known domain annotations that are detailed below.
|
plant 7 ILLFSTLSLFLNVSLADNHTAVVITTSDTPPPLPPPSPPP-RHNFTSSLMPGIAVVIAVLTAFFS 70
:||....|||..:...|....| |....||||:... ..|...:::.|....:.|..|.:|
Human 23 MLLELARSLFNRMDFEDLGLVV-----DWDHHLPPPAAKTVVENLPRTVIRGSQAALTVPWAQYS 82
plant 71 LTFLLL 76
..||.:
Human 83 SFFLFM 88
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| ATL43 | NP_196200.3 |
RING-H2_EL5_like |
145..188 |
CDD:319375 |
|
| RNF181 | XP_005264416.1 |
None |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Domainoid |
0 | 0.000 |
Not matched by this tool. |
| eggNOG |
0 | 0.000 |
Not matched by this tool. |
| Hieranoid |
0 | 0.000 |
Not matched by this tool. |
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
0 | 0.000 |
Not matched by this tool. |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoDB |
0 | 0.000 |
Not matched by this tool. |
| OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
| OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
| orthoMCL |
0 | 0.000 |
Not matched by this tool. |
| Panther |
0 | 0.000 |
Not matched by this tool. |
| Phylome |
1 |
0.910 |
- |
- |
|
|
| SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
| SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
| TreeFam |
1 |
0.960 |
- |
- |
|
|
|
3 | 2.870 |
|
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