DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment ATL43 and Rnf149

DIOPT Version :9

Sequence 1:	NP_196200.3	Gene:	ATL43 / 830466	AraportID:	AT5G05810	Length:	407	Species:	Arabidopsis thaliana
Sequence 2:	XP_017452282.1	Gene:	Rnf149 / 363222	RGDID:	1308460	Length:	394	Species:	Rattus norvegicus

Alignment Length:	188	Identity:	54/188 - (28%)
Similarity:	78/188 - (41%)	Gaps:	53/188 - (28%)

- Green bases have known domain annotations that are detailed below.

plant    58 IAVVIAVLT-AFFSLTFLLLLYVKHCKRRNGSVYVNHPQRFAITRYGGGYYNGGGVVGGRKNSGI 121
            :.|.||.:| ...||.:|:..|:               |||..|         |...|.:.:...
  Rat   198 VFVAIAFITMMIISLAWLIFYYI---------------QRFLYT---------GSQFGSQNHRKE 238

plant   122 DRSVIESLPV--FRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTC 184
            .:.||..||:  .:.|......|...||||:..|:..:|:|:|| |||.||..|:|.||..|.||
  Rat   239 TKKVIGQLPLHTVKHGEKGIDVDAENCAVCIENFKVKDVIRILP-CKHIFHRICIDPWLLDHRTC 302

plant   185 PLCR--------YRVDPEDI------------LLIGDCNSWFELQFSKDESNSVNNNP 222
            |:|:        |..||||.            :.:|:.:...:     ||..|.:|.|
  Rat   303 PMCKLDVIKALGYWGDPEDAQDLPIPEAAPGSVSVGNLSVTVQ-----DEERSESNLP 355

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
ATL43	NP_196200.3	RING-H2_EL5_like	145..188	CDD:319375	22/42 (52%)
Rnf149	XP_017452282.1	PA_GRAIL_like	45..181	CDD:239037
		UPF0233	<200..>220	CDD:299753	7/19 (37%)
		zf-RING_2	263..306	CDD:290367	22/43 (51%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	66	1.000	Domainoid score	I4247
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.910