Protein Alignment ATL43 and Rnf44

DIOPT Version :9

• Sequence 1: NP_196200.3
• Gene: ATL43 / 830466
• AraportID: AT5G05810
• Length: 407
• Species: Arabidopsis thaliana
• Sequence 2: XP_006253695.1
• Gene: Rnf44 / 361212
• RGDID: 1307212
• Length: 433
• Species: Rattus norvegicus
• Alignment Length: 151
• Identity: 51/151 - (33%)
• Similarity: 73/151 - (48%)
• Gaps: 17/151 - (11%)

plant    38 PLPPPSPPPRHNFTSSLMPGIAVVIAVLTAFFSLTFLLLLYVKHCKRRNGSVYVNHPQRFAITRY 102
            |||||.|||..::..|.:|....::.:.......|..|.|.|...:..|....:|..:|
  Rat   289 PLPPPPPPPPPSYYPSFLPYFLSMLPMSPTTVGPTISLDLDVDDVEMENYEALLNLAER------ 347

plant   103 GGGYYNGGGVVGGRKNSGIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKH 167
                      :|..|..|:.::.||.||.:||...|...:...|.||.:.||..::||:|| |.|
  Rat   348 ----------LGDAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLP-CNH 401

plant   168 AFHVECVDTWLDAHSTCPLCR 188
            .||.:|||.||.|:.|||:||
  Rat   402 EFHAKCVDKWLKANRTCPICR 422

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ATL43	NP_196200.3	RING-H2_EL5_like	145..188	CDD:319375	22/42 (52%)
Rnf44	XP_006253695.1	zf-RING_2	381..422	CDD:290367	22/41 (54%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X146
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.910