Protein Alignment ATL43 and Rnf128

DIOPT Version :9

• Sequence 1: NP_196200.3
• Gene: ATL43 / 830466
• AraportID: AT5G05810
• Length: 407
• Species: Arabidopsis thaliana
• Sequence 2: NP_001166820.1
• Gene: Rnf128 / 315911
• RGDID: 1566282
• Length: 428
• Species: Rattus norvegicus
• Alignment Length: 388
• Identity: 89/388 - (22%)
• Similarity: 122/388 - (31%)
• Gaps: 153/388 - (39%)

plant    16 FLNVSLADNHTAVVITT----------SDTP-PP----LPPPSPP-------PRHNFTSSLMPGI 58
            :||||....|..|..|.          .|:| .|    |.||..|       |..|||...:.|.
  Rat    46 YLNVSWRVPHPGVNRTVWELSEEGVYGQDSPLEPVSGVLVPPDGPGALNACNPHTNFTVPTVWGS 110

plant    59 AVVI---AVLTAFFSLTFLLLLYVKHCKRRNGSVYVNHP-------------------------- 94
            .|.:   |::......||...:::.:.:..:|:|..|.|
  Rat   111 TVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAGDIVAIMIGNLK 175

plant    95 --------QR------------------------------FAITRYGGGY---YNGGGVVGGRKN 118
                    ||                              |.||....||   |:...:...|..
  Rat   176 GTKILQSIQRGIQVTMVIEVGKKHGPWVNHYSIFFVSVSFFIITAATVGYFIFYSARRLRNARAQ 240

plant   119 S------------GIDRSVIESLPVFRFGALSGHK----DGLECAVCLARFEPTEVLRLLPKCKH 167
            |            .|.|..:.:|.       .|.|    ||..||||:..::|.:|:|:| .|.|
  Rat   241 SRKQRQLKADAKKAIGRLQLRTLK-------QGDKEIGPDGDSCAVCIELYKPNDVVRIL-TCNH 297

plant   168 AFHVECVDTWLDAHSTCPLCRYRVDPEDILLIGDCNSWFELQFSKD-ESNSVNNNPPGLTRFIPV 231
            .||..|||.||..|.|||:|:             |:....|....| |..||:..       :||
  Rat   298 IFHKTCVDPWLLEHRTCPMCK-------------CDILKALGIEVDVEDGSVSLQ-------VPV 342

plant   232 SRISGRHSSAGERASRLNEIRTSSSYKSNPMSFRRSLDSSLKVNDAGEEKSESVAVNCLDRLQ 294
            |..:...:|..|..:|..  ..||.|.|              |..|.|...|..|.:..:.||
  Rat   343 SNEASNTASPHEEDNRSE--TASSGYAS--------------VQGADEPPLEEHAQSANENLQ 389

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ATL43	NP_196200.3	RING-H2_EL5_like	145..188	CDD:319375	21/42 (50%)
Rnf128	NP_001166820.1	PA_GRAIL_like	48..193	CDD:239037	28/144 (19%)
		zf-RING_2	275..318	CDD:290367	21/43 (49%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	66	1.000	Domainoid score	I4247
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.910