DRSC/TRiP Functional Genomics Resources

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Protein Alignment AT5G05280 and ASR1

DIOPT Version :9

Sequence 1:NP_196147.1 Gene:AT5G05280 / 830410 AraportID:AT5G05280 Length:176 Species:Arabidopsis thaliana
Sequence 2:NP_015418.2 Gene:ASR1 / 856208 SGDID:S000006297 Length:288 Species:Saccharomyces cerevisiae


Alignment Length:49 Identity:22/49 - (44%)
Similarity:23/49 - (46%) Gaps:8/49 - (16%)


- Green bases have known domain annotations that are detailed below.


plant   112 ECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHS-----SCPTCR 155
            ||.|||.|..|||....|..|.|.||:.||..|   |.     .||.||
Yeast     3 ECPICLADDQEGEQFGCLNVCGHKFHLNCIREW---HKYSINLKCPICR 48

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AT5G05280NP_196147.1 RING-H2_EL5_like 112..155 CDD:319375 20/47 (43%)
ASR1NP_015418.2 RING-H2 4..48 CDD:319362 19/46 (41%)
PHD 121..167 CDD:214584
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 50 1.000 Domainoid score I3034
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X150
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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