Protein Alignment AT5G05280 and rnf11a

DIOPT Version :9

• Sequence 1: NP_196147.1
• Gene: AT5G05280 / 830410
• AraportID: AT5G05280
• Length: 176
• Species: Arabidopsis thaliana
• Sequence 2: NP_957315.1
• Gene: rnf11a / 393996
• ZFINID: ZDB-GENE-040426-1277
• Length: 146
• Species: Danio rerio
• Alignment Length: 85
• Identity: 29/85 - (34%)
• Similarity: 39/85 - (45%)
• Gaps: 28/85 - (32%)

plant    72 FTPNEDPVDTNANVAKGIKKRALKVIPVDSYSPELKMKATECLICLGDFVEGETVRVLPKCNHGF 136
            |.|..:|.|      |.||                     ||:||:.||..|:.:|.|| |.|.:
Zfish    77 FDPGSEPSD------KKIK---------------------ECVICMMDFEYGDPIRFLP-CMHIY 113

plant   137 HVKCIDTWLLSHSSCPTCRQ 156
            ||.|||.||:...:||:|.:
Zfish   114 HVDCIDAWLMRSFTCPSCME 133

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
AT5G05280	NP_196147.1	RING-H2_EL5_like	112..155	CDD:319375	21/42 (50%)
rnf11a	NP_957315.1	Vinculin	<10..>70	CDD:279395
		zf-RING_2	90..131	CDD:290367	21/41 (51%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	67	1.000	Inparanoid score	I3018
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000414
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X150
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.960