DRSC/TRiP Functional Genomics Resources

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Protein Alignment AT5G05280 and CG32850

DIOPT Version :9

Sequence 1:NP_196147.1 Gene:AT5G05280 / 830410 AraportID:AT5G05280 Length:176 Species:Arabidopsis thaliana
Sequence 2:NP_726563.1 Gene:CG32850 / 318246 FlyBaseID:FBgn0052850 Length:147 Species:Drosophila melanogaster


Alignment Length:86 Identity:36/86 - (41%)
Similarity:48/86 - (55%) Gaps:8/86 - (9%)


- Green bases have known domain annotations that are detailed below.


plant    73 TP---NEDPVDTN-ANVAKGIKKRALKVIPVDSYSPELKMKATECLICLGDFVEGETVRVLPKCN 133
            ||   |....|.| ..:||.|  ..::.:|:.:|....| ||.||:||:.:|...|.||.|| |.
  Fly    51 TPSSNNRQLSDENQVKIAKRI--GLMQYLPIGTYDGSSK-KARECVICMAEFCVNEAVRYLP-CM 111

plant   134 HGFHVKCIDTWLLSHSSCPTC 154
            |.:||.|||.|||...:||:|
  Fly   112 HIYHVNCIDDWLLRSLTCPSC 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AT5G05280NP_196147.1 RING-H2_EL5_like 112..155 CDD:319375 23/43 (53%)
CG32850NP_726563.1 zf-RING_2 91..132 CDD:290367 22/41 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 59 1.000 Domainoid score I3886
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000414
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X150
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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