back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment AT5G05280 and RNF11

DIOPT Version :9

Sequence 1:	NP_196147.1	Gene:	AT5G05280 / 830410	AraportID:	AT5G05280	Length:	176	Species:	Arabidopsis thaliana
Sequence 2:	NP_055187.1	Gene:	RNF11 / 26994	HGNCID:	10056	Length:	154	Species:	Homo sapiens

Alignment Length:	93	Identity:	32/93 - (34%)
Similarity:	53/93 - (56%)	Gaps:	12/93 - (12%)

- Green bases have known domain annotations that are detailed below.

plant    73 TPNEDPVDTNANVAKGIK--KR--ALKVIPVDSYSP-----ELKMKATECLICLGDFVEGETVRV 128
            ||::..:.|.....:.|:  :|  .::.:|...|.|     |.|::  ||:||:.|||.|:.:|.
Human    52 TPSQTRLATQLTEEEQIRIAQRIGLIQHLPKGVYDPGRDGSEKKIR--ECVICMMDFVYGDPIRF 114

plant   129 LPKCNHGFHVKCIDTWLLSHSSCPTCRQ 156
            || |.|.:|:.|||.||:...:||:|.:
Human   115 LP-CMHIYHLDCIDDWLMRSFTCPSCME 141

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.