Protein Alignment SAMC1 and sea

DIOPT Version :9

• Sequence 1: NP_001190968.1
• Gene: SAMC1 / 830101
• AraportID: AT4G39460
• Length: 325
• Species: Arabidopsis thaliana
• Sequence 2: NP_001027175.1
• Gene: sea / 3772221
• FlyBaseID: FBgn0037912
• Length: 317
• Species: Drosophila melanogaster
• Alignment Length: 313
• Identity: 88/313 - (28%)
• Similarity: 136/313 - (43%)
• Gaps: 44/313 - (14%)

plant    32 INKGFFAS-VNTQEDKPF---------DFFRTLFEGFIAGGTAGVVVETALYPIDTIKTRLQAAR 86
            :::..||| |:....:|:         |..:...:|.:|||..|.:.....||.:.:||:||...
  Fly     1 MDRSAFASLVSPYRRRPWMTEHGAAAADSGQVGLKGIVAGGITGGIEICITYPTEYVKTQLQLDE 65

plant    87 GG----------------GKIVLKGLYSGLAGNIAGVLPASALFVGVYEPTKQKLLKTFPDHLSA 135
            .|                |:....|||.||:..:.|.:|.||...|.:|..|...:.: ...||.
  Fly    66 KGAAKKYNGIFDCVKKTVGERGFLGLYRGLSVLVYGSIPKSAARFGAFEFLKSNAVDS-RGQLSN 129

plant   136 VAHLTAGAIGGLAASLIRV-PTEVVK------QRMQTGQFTSAPSAVRMIASKEGFRGLYAGYRS 193
            ...|..|...|:..:::.| |.|.:|      ||....:|......|..|...||..|:|.|...
  Fly   130 SGKLLCGLGAGVCEAIVAVTPMETIKVKFINDQRSGNPKFRGFAHGVGQIIKSEGISGIYKGLTP 194

plant   194 FLLRDLPFDAIQFCIYEQLCLGYKKAARRELSDPENALIGAFAGALTGAVT----TPLDVIKTRL 254
            .:|:.....||:|.:.|.|...||   ..:.:.|...|:....||:.||.:    |||||:|||:
  Fly   195 TILKQGSNQAIRFFVLESLKDLYK---GDDHTKPVPKLVVGVFGAIAGAASVFGNTPLDVVKTRM 256

plant   255 MVQG-SAKQYQGIVDCVQTIVREEGAPALLKGIGPRVLWIGIGGSIFFGVLES 306
              || .|.:|:....|...|::.||..|..||..||:..:.:..:|.|.:.:|
  Fly   257 --QGLEASKYKNTAHCAVEILKNEGPAAFYKGTVPRLGRVCLDVAITFMIYDS 307

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SAMC1	NP_001190968.1	PTZ00168	55..304	CDD:185494	81/276 (29%)
sea	NP_001027175.1	PTZ00168	34..302	CDD:185494	80/273 (29%)
		Mito_carr	34..117	CDD:278578	24/82 (29%)
		Mito_carr	125..220	CDD:278578	27/97 (28%)
		Mito_carr	235..314	CDD:278578	28/75 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910