DRSC/TRiP Functional Genomics Resources

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Protein Alignment AT4G28370 and rnf11a

DIOPT Version :10

Sequence 1:NP_194566.3 Gene:AT4G28370 / 828953 AraportID:AT4G28370 Length:562 Species:Arabidopsis thaliana
Sequence 2:NP_957315.1 Gene:rnf11a / 393996 ZFINID:ZDB-GENE-040426-1277 Length:146 Species:Danio rerio


Alignment Length:52 Identity:16/52 - (30%)
Similarity:25/52 - (48%) Gaps:3/52 - (5%)


- Green bases have known domain annotations that are detailed below.


plant   511 DCVICMTAIDLRQHTSDCMVTPCEHFFHSGCLQRWMDIKMECPTCRRSLPPA 562
            :|||||  :|. ::.......||.|.:|..|:..|:.....||:|...:..|
Zfish    90 ECVICM--MDF-EYGDPIRFLPCMHIYHVDCIDAWLMRSFTCPSCMEPVDAA 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AT4G28370NP_194566.3 RING-H2_TUL1-like 506..561 CDD:438479 15/49 (31%)
rnf11aNP_957315.1 RING-H2_RNF11 90..132 CDD:438131 14/44 (32%)

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