Protein Alignment AT4G28370 and dsc1

DIOPT Version :10

• Sequence 1: NP_194566.3
• Gene: AT4G28370 / 828953
• AraportID: AT4G28370
• Length: 562
• Species: Arabidopsis thaliana
• Sequence 2: NP_595266.2
• Gene: dsc1 / 2541251
• PomBaseID: SPBC947.10
• Length: 695
• Species: Schizosaccharomyces pombe
• Alignment Length: 649
• Identity: 145/649 - (22%)
• Similarity: 240/649 - (36%)
• Gaps: 201/649 - (30%)

plant    49 FGRKQEAEVGPFSAWNITGTYRGTWKFLNS--LNSSSKFQD--FQKENGNSVVELVAVPTKITGV 109
            ||:     |.|...|:.|         |.:  ::.|.:|..  ::..:|||           .|:
pombe   109 FGK-----VSPNVTWHTT---------LRNIVMSQSGRFSANLYEYVDGNS-----------DGI 148

plant   110 HYV------QGVVVFHDVFDNEQ---------------NVGGAQI--------------NLEGVY 139
            .:|      ....|:|..|..::               |.||..:              .|:|..
pombe   149 SFVLNLENNNDTSVYHMTFHGDRVKPINVFLGSTDVTPNFGGVDVIPWLLKDSPYKDAPPLDGTE 213

plant   140 IWPFRQLRLVANSGKESDSGQEDNNLLSNPYHLLGIFSSQVFQESPRDRLLKRKLSPVNEMEKHC 204
            .:|..|.|    |.:..::..:|...:.        :|..||:|.
pombe   214 YFPLLQNR----SLERIETRLQDAQTVG--------WSPLVFEEE-------------------- 246

plant   205 NIEIAAQVSRVASSENNG---------DKNYYHMEGL--MESPGVGDDGDCFSP------LLLNA 252
              |:.........::|.|         :..:||.:|:  .:.|.|...|..:||      ...|.
pombe   247 --EVTCSAFVFLHNKNTGLDKETLKAIENEFYHPQGVSTQKMPEVFVSGLVYSPDCNVAFTFSNT 309

plant   253 TSVNVEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHGNTQSGAAKVSIVMIGQQAIMDAYLCLLH 317
            ......|..|..|.::.:..|:...|:.:|:|||.. |:.|...::|.:.|..||.:|||:.:..
pombe   310 KGPRNFVLENHLVRFSSLYIFIVLSQIFVLLRQMRI-NSPSHVQRLSFLTIAMQAGLDAYIAIFF 373

plant   318 LTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKA-------------------------- 356
            |:...::|..:..|.:.||...|...:|.||||..|.:.
pombe   374 LSTNAVIEKGYLPFVSVAFLSLVPSVMFTMRYLALILRVQNSNMPPPAPRPVTNNSSNNNTNQSN 438

plant   357 -------TRPSNSGEGWETM------------------RRELSFLYSRFYGILLGGIL------- 389
                   ..||.:.:..||.                  :|:.|.:..|||.|:|...:
pombe   439 ASNENSPNAPSAANDNTETTTVNPPQEDDQPMTQHERDQRDWSAVCLRFYFIILVVCIASLYSAF 503

plant   390 --IMYQFHNYMQPILLLMYSFWIPQIVANVVRDSRKPLHPYYILGMTATRLAIPLYVFGCPHNFM 452
              ::|:|: ::..::...||||||||:.||.:.:.:.....||||.:..||.:||.:|......:
pombe   504 WPVIYRFY-FISALIFTSYSFWIPQIIQNVKQGTSRSFTWTYILGASVLRLYLPLAIFIDSELIL 567

plant   453 RVEPNKVWCICLCTFMGLQAVILLLQHYFGSRCFVPRQMLPEK--YNYH--------RRFNRDVS 507
            ...|...:.:.|..:|..|.::||:|...|.|.|:|::.....  |:||        ..|.||.:
pombe   568 GFPPKYFFALGLVLWMLFQVLVLLVQDTLGPRFFLPKKFFLSSPVYDYHPVIQQDDLEAFMRDAN 632

plant   508 RTTDCVICMTAIDLRQHTS-----------DCMVTPCEHFFHSGCLQRWMDIKMECPTCRRSLP 560
               .|.|||..|:|....|           :.|:|||.|.:|..||.:||:.:..||.||..||
pombe   633 ---VCPICMQPIELVSTGSTLNPASMMVRRNYMLTPCHHLYHRQCLLQWMETRSICPVCRCHLP 693

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
AT4G28370	NP_194566.3	RING-H2_TUL1-like	506..561	CDD:438479	23/66 (35%)
dsc1	NP_595266.2	COG5540	<486..693	CDD:227827	64/210 (30%)
		RING-H2_TUL1-like	628..694	CDD:438479	25/69 (36%)