Sequence 1: | NP_006006.3 | Gene: | ARID1A / 8289 | HGNCID: | 11110 | Length: | 2285 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001163639.1 | Gene: | osa / 42130 | FlyBaseID: | FBgn0261885 | Length: | 2716 | Species: | Drosophila melanogaster |
Alignment Length: | 2822 | Identity: | 777/2822 - (27%) |
---|---|---|---|
Similarity: | 1068/2822 - (37%) | Gaps: | 881/2822 - (31%) |
- Green bases have known domain annotations that are detailed below.
Human 23 ELKKAEQQQREEAGGEAAAAAAAERGEMKAAAGQESEGPAVGPPQPLGKELQDGAESNGGGGGGG 87
Human 88 AGSGGGPGAEPDLKNSNGNAGPRPALNNNLTEPPGGGGGGSSDGVGAPPHSAAAALPPPAYGFGQ 152
Human 153 PYGRSPSAVAAAAAAVFHQQHGGQQS----PGLAALQSGGG------GGLEPYAGPQQNSHDHGF 207
Human 208 PNH---QYNSYY--PNRSAYPPPAPAYALSSPRGGTPGSGAAAAAGSKPP----------PSSSA 257
Human 258 SASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSARGYQGYPGGDYSGGPQD 322
Human 323 GGAGKGPADMASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSPMDQM 387
Human 388 GKMRPQPYGGTNPYSQQQG---PPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSYTQ 449
Human 450 QIPPYGQQGPSGYGQ-QGQTPYY-NQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQ 512
Human 513 SSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPP------YSQPQAQSPYQQQQPQQPAP- 570
Human 571 -STLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQS 634
Human 635 RPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSP-HLPGIRGPSPS 698
Human 699 -----PVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQR--- 755
Human 756 -------NPQMPQYSSPQPGSALS--------PRQPSGG------QIHTGMGSYQQNSMG----- 794
Human 795 -SYGPQGGQYGPQGGYPRQPNYNALPNANYP-----SAGMAGGINPMGAGGQMHGQPG------- 846
Human 847 --IPPYGTLPP--------GRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAM 901
Human 902 HVAANSIQNR------------PPGYPN----MNQGGMMG----TGPPYG--------------- 931
Human 932 -------QGINSMAGM-------------INPQGPPYSMG-----------------------GT 953
Human 954 MANNSAGMAASPEMMGLGDVKLTPATKMNN----------------------------------- 983
Human 984 ---KADGTPKT-------ESKSKKSSSSTTTNEKITKLYELGGEPERKMWVDRYLAFTEEKAMGM 1038
Human 1039 TNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAF 1103
Human 1104 ECKIERGE-DPPPDI--FAAADSKKSQPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTP 1165
Human 1166 ASTPHSQIPPLPGMSRSNSVGIQDAFNDGSDSTFQ------KRNSMTPNPGYQPSMNTSDMMGRM 1224
Human 1225 SYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDPYSRAAGPG-LGNVAMGPRQHYP-------- 1280
Human 1281 ---YGGPYDRVRTE---PGI----------GPEGNM---STG-----APQ---PNLMPSNPD--- 1315
Human 1316 ------------SGMYSP-SRYPPQQQQQQQQRHDSYG--NQFSTQGTPSGSPF-------PSQQ 1358
Human 1359 TTMYQQQ------------------QQNYKRPMDG---------TYGPPAKRHEGEMYSVPYSTG 1396
Human 1397 QGQPQQQ---QLPPAQ-PQPASQQ---QAAQPSP----QQDVY-------NQYGNAYPATAT--- 1440
Human 1441 --------AATE---------RRPAG-------------GP-------------QNQFPFQFGRD 1462
Human 1463 RVSAPPGTNAQQNMPPQMM---------------GGPIQASAEVAQQGTMWQGRNDMTYNYANRQ 1512
Human 1513 STGSAPQGPAYHGVNRTDEMLHTDQRANHEGSWPSHGTRQPPYGPSAPV-PPMTRPPPSN----- 1571
Human 1572 ---YQPPPSMQNHIPQVSSPAPLP------RPMENRTSPSKSPFLHSGMKMQKAGPPVPASHIAP 1627
Human 1628 APVQPP--------MIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGLLAES 1684
Human 1685 TWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPGR 1749
Human 1750 FSKVSSPAPMEGGEEEEELLGPKLEEEEEEEVV------------------------ENDEEIAF 1790
Human 1791 SGKD--------KPASE-----------NSEEK-LISKFDK---------LPVKI-VQKNDPFVV 1825
Human 1826 DCSDKLGRVQEFDSGLLH----------WRIG--------------------------------G 1848
Human 1849 GDTTE--------HIQT--------------------------HFESKTELLPSRPHAPCPPAPR 1879
Human 1880 KHVTTAEGTPGTTDQEGPPPD---GPPEKRITATMDDMLSTRS----STLTEDGAKSSEAIKESS 1937
Human 1938 KFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVCVSNTIRSLSFVPGNDFEMS 2002
Human 2003 KHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKV----EWWWDCLEMLRENTLVT 2063
Human 2064 LANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFSTLGPNAVLSPQRLVLETLSKLSIQ 2128
Human 2129 DNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSIG 2193
Human 2194 NLLGFLEDSLAATQFQQSQASLLHM-QNPPFEPTSVDMMRRAARALLALAKVDENHSEFTLYESR 2257
Human 2258 LLDISVSPLMNSLVSQVICDVLFLIGQ 2284 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ARID1A | NP_006006.3 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..820 | 231/870 (27%) | |
LXXLL | 295..299 | 2/3 (67%) | |||
PABP-1234 | <372..469 | CDD:130689 | 30/100 (30%) | ||
PRK07764 | <598..729 | CDD:236090 | 40/136 (29%) | ||
Med15 | 713..>947 | CDD:312941 | 82/340 (24%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 978..1005 | 4/71 (6%) | |||
ARID_ARID1A | 1018..1110 | CDD:350640 | 42/91 (46%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1113..1483 | 132/544 (24%) | |||
Nuclear localization signal. /evidence=ECO:0000269|PubMed:26614907 | 1368..1387 | 7/27 (26%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1539..1603 | 22/78 (28%) | |||
LXXLL | 1709..1713 | 3/3 (100%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1747..1774 | 4/26 (15%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1859..1907 | 14/50 (28%) | |||
LXXLL | 1967..1971 | 1/3 (33%) | |||
BAF250_C | 1976..2231 | CDD:403301 | 125/259 (48%) | ||
LXXLL | 2085..2089 | 2/3 (67%) | |||
osa | NP_001163639.1 | BRIGHT | 1001..1092 | CDD:128777 | 42/90 (47%) |
DUF3518 | 2191..2451 | CDD:288854 | 125/259 (48%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165155640 | |
Domainoid | 1 | 1.000 | 253 | 1.000 | Domainoid score | I2082 |
eggNOG | 1 | 0.900 | - | - | E1_KOG2510 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 634 | 1.000 | Inparanoid score | I836 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG46609 | |
OrthoDB | 1 | 1.010 | - | - | D135670at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002548 | |
OrthoInspector | 1 | 1.000 | - | - | otm41619 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104640 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR12656 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4068 |
SonicParanoid | 1 | 1.000 | - | - | X2249 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
13 | 12.930 |