Protein Alignment RIN2 and Trc8

DIOPT Version :9

• Sequence 1: NP_001328533.1
• Gene: RIN2 / 828626
• AraportID: AT4G25230
• Length: 578
• Species: Arabidopsis thaliana
• Sequence 2: NP_996303.1
• Gene: Trc8 / 43476
• FlyBaseID: FBgn0039668
• Length: 809
• Species: Drosophila melanogaster
• Alignment Length: 588
• Identity: 130/588 - (22%)
• Similarity: 215/588 - (36%)
• Gaps: 145/588 - (24%)

plant    14 ALSFV---GLQVWTELSLDRLRADG---------LIAKNISLG--DSEHALELL----------- 53
            |::||   ||....|....||....         ||....:|.  :|:..|:|:
  Fly   290 AMNFVSNFGLSALIENEWQRLNVPNVLRVFWTIRLIQGGYALATTESDEPLDLMTATQKLLVDGC 354

plant    54 ------LGSYFTIALLTNFV---LNVYILLVLSLKTLFFGDLYDVETKKL--VERLANYIIYKGT 107
                  ||....|::..:::   ...|:|            .||.|.|.|  |..:..||:...|
  Fly   355 ETMTAVLGMTGVISMFCHYIGRGFQWYLL------------TYDDEEKSLGTVSAVLFYILALQT 407

plant   108 FLPLVIPPTIFQGVLWTVWLTVLCTLKMFQALARDRLERLNASPSSTPWTYFRVYSV--LFLVLS 170
            .|..:.|...|..:...:.|.:...|.....:....|..|:|:.:.:...:.|..||  ..:|||
  Fly   408 GLTSLSPDKRFIRLCRNLCLLMTALLHFLHNIVSPILMSLSAARNPSRKRHVRALSVCAFLVVLS 472

plant   171 VDM---FWIKLSLMTY--------------NTIGSAVYLLLLFEPCSIAFETLQALLIHGFQLLD 218
            |.:   .|.:.|:.|:              ..:..|.|.|.|.:.....|          ::.||
  Fly   473 VSLLYHLWSQQSISTWLLAVTAFSVEVVVKVLVSLATYTLFLLDARRQFF----------WEKLD 527

plant   219 MWINHLAVKNSDCQRSKFIDSMTAGS-LLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWLHGIA 282
            .::.::....:..:....|.....|: :|.::...|...|   .:..::|.:..|.:||
  Fly   528 DYLYYVRAFGNSVEFCFGILLFINGAWILIFESAQNATGG---GIRAIMMCIHAYFNIW------ 583

plant   283 FHLVDAVLFLNIRALLSAILKRIKGYIKLRIALGALHAALPDATSEELRAYDDECAICREPMAKA 347
                     ...||..|..:||.....|:        :|||:||..:|:|:||.||||.:.|..|
  Fly   584 ---------CEARAGWSVFMKRRSAVHKI--------SALPEATPAQLQAFDDVCAICYQEMYSA 631

plant   348 KRLHCNHLFHLGCLRSWL---DQGLNEVYSCPTCRK-PLFVGRT-ENEVNPRTVEVSSDEQLARQ 407
            |...|.|.||..|||.||   |:       ||.|.: .::..:. ||.........:..||..|.
  Fly   632 KITRCRHFFHGVCLRKWLYVQDR-------CPLCHEIMMYTDKADENAPEAEPAPAAQAEQPMRI 689

plant   408 LERQ--NNPVHALATGLFPAEVPDSVENDTSRNLGLDPSWLQTWSSQGSDVAGPSTTSRTVGLGR 470
            ..|.  ||   |.|....|...|  ||                 :|:.:.....|:.:.|:|...
  Fly   690 YPRDDANN---AAAQRRSPERAP--VE-----------------ASEQAPATSSSSAAATIGAEA 732

plant   471 VQMMMRHLASVGESYAQTALDDAAWSLWPMNPSQAS-----TSSTTVPPGNGGRTGGLHLRTVSN 530
            |..::...|:|||:.:..::..::.:...::.|.:|     |:|...||........:.....||
  Fly   733 VSAIVESAAAVGEARSLVSVASSSSATHRISASGSSDSSYMTASAQSPPPTATSAAAVATAAASN 797

plant   531 TTN 533
            ||:
  Fly   798 TTH 800

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RIN2	NP_001328533.1	None
Trc8	NP_996303.1	TRC8_N	122..590	CDD:290425	64/339 (19%)
		zf-rbx1	<618..659	CDD:289448	21/47 (45%)
		zf-RING_2	619..659	CDD:290367	20/46 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5243
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	73	1.000	Inparanoid score	I2439
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D897451at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.870