Protein Alignment RIN2 and amfra

DIOPT Version :9

• Sequence 1: NP_001328533.1
• Gene: RIN2 / 828626
• AraportID: AT4G25230
• Length: 578
• Species: Arabidopsis thaliana
• Sequence 2: NP_998328.2
• Gene: amfra / 406442
• ZFINID: ZDB-GENE-040426-2190
• Length: 620
• Species: Danio rerio
• Alignment Length: 566
• Identity: 143/566 - (25%)
• Similarity: 231/566 - (40%)
• Gaps: 143/566 - (25%)

plant    25 ELSLDRLRADGLIAKNISLGDSEHALELLLGSYFTIALLTNFVLNVYILLVLSLKTLFFGDLYDV 89
            ||.|:.|   |.:|..:       .|.|:..|.| :.::.|....:.:|:...::.:.||.|...
Zfish    53 ELKLENL---GNVATGV-------LLHLITDSLF-VWVMVNTACCILMLIGKVIQCIVFGPLRVS 106

plant    90 ETKKLVERLANYIIYKGTFLPLVI-PPTIFQGVLWTVWLTVLCTLKMFQALARDRLERLNASPSS 153
            |.:.|.::..|:|.||..|:..|: ...:.:.|||.:|.::|..|.:...|.:||.|.|:.||::
Zfish   107 EKQHLKDKFWNFIFYKFIFIFGVLNVQRVEEVVLWCLWFSMLIFLHLMVQLCKDRFEYLSFSPTT 171

plant   154 TPWTYFRVYSVLFLVLSVDMFWIKLSLMTYNTIGSAVYLLLLFEPCSIAFETLQALLIHGFQLLD 218
            ...::.||.::|..|||.......|..:..:..|......:..|...:...|...::.:...|.|
Zfish   172 PMSSHVRVLALLVSVLSCCGGLAVLCALAGHIHGMHTVAFMAAECLLVTVRTGHVIIRYSIHLWD 236

plant   219 MWINHLAVKNSDCQRSKFIDSMTAGSLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWLHGIAF 283
              :||.....:......:.|                   |.:::|.|.:.|.|::|:.....|..
Zfish   237 --LNHEGTWENKSSYIYYTD-------------------FIMELAILSLDLMHHIHMLLFGNIWL 280

plant   284 HLVDAVLFLNIRALLSAILKRI---KGYIKLRIALGALHAALPDATSEELRAYDDECAICREPMA 345
            .:...|:|:.:|.|...:.:||   |.|:::   :..:.:....||.|||.|.:|:||||.:.|.
Zfish   281 SMASLVIFMQLRHLFHEVQRRIRRHKNYLRV---IDNMESRFAVATPEELAANNDDCAICWDSMT 342

plant   346 KAKRLHCNHLFHLGCLRSWLDQGLNEVYSCPTCRKPLFV--GRTENEVNPRTVEVSSDEQLARQL 408
            .|::|.|.||||..||||||:|..    ||||||..|.:  ||.|.|
Zfish   343 TARKLPCGHLFHNSCLRSWLEQDT----SCPTCRMSLNIHEGRRERE------------------ 385

plant   409 ERQNNPV--HALATGLFPAEVPDSVEN-----DTSRNLGLDPSWLQTWSSQGSDVAGPSTTSRTV 466
            |.|..|:  :..|.|...|....:..|     |.||    ..|||.::|
Zfish   386 EGQREPLEDNMAAAGAADARAHINQHNHFFHFDGSR----IASWLPSFS---------------- 430

plant   467 GLGRVQMMMRHLASVGESYAQTALDDAAWSLWPMNPSQASTSSTTVPPGNGGRTGGLHLRTVSNT 531
                |::|  |..::                  :..:||:.|..     ||
Zfish   431 ----VEVM--HTTNI------------------LGIAQANNSQL-----NG-------------- 452

plant   532 TNESLTNILAMAETVREVMPHVPDEIIFQDLQRTNSVAVTVNNLLQ 577
                      ||..::|:.|.||..:|.||||.|.||.||.:|:|:
Zfish   453 ----------MAHQIQEMFPQVPYHLILQDLQLTRSVEVTTDNILE 488

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RIN2	NP_001328533.1	None
amfra	NP_998328.2	zf-rbx1	79..>375	CDD:331150	88/323 (27%)
		RING-H2_AMFR	332..375	CDD:319369	26/46 (57%)
		RING-H2 finger (C3H2C3-type)	334..371	CDD:319369	22/40 (55%)
		CUE_AMFR	451..491	CDD:270604	20/62 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	41	1.000	Domainoid score	I5757
eggNOG	1	0.900	-	-		E1_COG5243
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	173	1.000	Inparanoid score	I1859
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D897451at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_105132
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X3836
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	8	7.770