DRSC/TRiP Functional Genomics Resources

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Protein Alignment VSR7 and astn1

DIOPT Version :9

Sequence 1:NP_001190777.1 Gene:VSR7 / 827757 AraportID:AT4G20110 Length:628 Species:Arabidopsis thaliana
Sequence 2:NP_001072522.1 Gene:astn1 / 779977 XenbaseID:XB-GENE-979962 Length:1302 Species:Xenopus tropicalis


Alignment Length:107 Identity:31/107 - (28%)
Similarity:50/107 - (46%) Gaps:27/107 - (25%)


- Green bases have known domain annotations that are detailed below.


plant   469 YGPAR-CTMNNGGCWSDTRNGLTFSACSDSV--STGCKCPEGFQGDGLTCEDINECKERSVCQCS 530
            :||.| |:.:||||   |:|   |...||..  |:||.||.|..    ..:|::.|.:|.:    
 Frog   605 FGPVRDCSKDNGGC---TKN---FRCVSDRKLDSSGCVCPSGLS----PMKDLSGCYDRQM---- 655

plant   531 GCRCKNSW-GGYKCSCSGDRLYINDQDT---------CIERY 562
            |..|.:.: ||.:..|..:.:.::::..         |||.|
 Frog   656 GVDCSDGFNGGCEQLCLHEDVPLSEESDLYNIYMYCGCIEEY 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VSR7NP_001190777.1 PA_VSR 53..176 CDD:239040
VESA1_N <494..>564 CDD:289551 20/81 (25%)
EGF_CA 517..>545 CDD:238011 7/28 (25%)
astn1NP_001072522.1 MACPF 811..999 CDD:214671
Annexin_like 1153..1244 CDD:375837
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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